| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36480 |
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| Symbol | |
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| ID | 8388969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3969225 |
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| End bp | 3970175 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977661 |
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| Product | DMT(drug/metabolite transporter) superfamily permease |
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| Protein accession | YP_003135427 |
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| Protein GI | 257057595 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.171631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.909358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACGTC TCGATCGACT TCTCGCCGTG CTCACCGCCG TCCTCTGGGG CTGCAACTTC
CTCGCGGTCC ACGCGATGCT CACGCACTTC CCACCGCTGT TCGCGGGCTG CATCCGGTTC
GTGCTCGTCG CCCTGCCCAC GATGGTCTTC GTGCCGTGGC CGAAAGTCCG AGTCCGGTGG
CTGATCGGGT ACGGCCTCGG GTTCGCCACG TTGCAGTTCG CGTTCCTGTT CGTCGCCATG
GACACCGGCA TGCCGACCGG ACTCGCGTCG CTCGTGTTGC AGGCCTCGGC GCCGTTCACC
GTCGTCCTCG GTGCGCTGCT GTTGCGGGAA CGGTTGAGCG GCCGACAGGT CGTGGGCATC
GTCTTCGCCG TCCTCGGCAT GGCGGCCATC GCGTGGCAAC GCGCCGAGCA CGCGGCTCTG
CTGCCGGTGA TCCTGACCCT GCTCGGCGCC CTGAGCTGGG CGGTGGGCAA CCTGTGCGCG
CGCAAGGCCG AGGCTGTCAA CCCGCTGCAC TTCACGCTGT GGGCGTCGGT GGTCCCGCCG
ATCCCGATGT TCGCGCTGTC ACTGCTCTTC GAAGGGCTGG ACGCCCAGTG GACCGCGGTG
TCGACGGCGT TGTCCGGCGA CGCCTGGATC GCGCTCGCGG GCCTGGCCTA CGTCGTGGTC
TTCGGCACGG TCGTGGGCTC GGGCATCTGG ACCACGCTCA TGCGCCGCAA CCCCGCGAGC
ACGGTCGCGC CCTTCTCGTT GCTGGTGCCC GTGGTGGGGC TCAGTCTGGC GTTCGTCCTG
CTCGACGAGC GACCGACGCC CGTGGAGATC GCTGCCGCGG TGGTCGTGGT CGGCGGAGTG
CTGTTGGGGT CACTTCCCCG CCGACCACGA CGGCGCGCTC AGGCCGACAC CGGCTCCTCC
GCCGGCTCCG ACCGCGGCGA CACGCGCCCC GCGAGGATGT CCTCGGCGTA G
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| Protein sequence | MPRLDRLLAV LTAVLWGCNF LAVHAMLTHF PPLFAGCIRF VLVALPTMVF VPWPKVRVRW
LIGYGLGFAT LQFAFLFVAM DTGMPTGLAS LVLQASAPFT VVLGALLLRE RLSGRQVVGI
VFAVLGMAAI AWQRAEHAAL LPVILTLLGA LSWAVGNLCA RKAEAVNPLH FTLWASVVPP
IPMFALSLLF EGLDAQWTAV STALSGDAWI ALAGLAYVVV FGTVVGSGIW TTLMRRNPAS
TVAPFSLLVP VVGLSLAFVL LDERPTPVEI AAAVVVVGGV LLGSLPRRPR RRAQADTGSS
AGSDRGDTRP ARMSSA
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