Gene Svir_36420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36420 
Symbol 
ID8388963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3963746 
End bp3964300 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content74% 
IMG OID644977656 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003135422 
Protein GI257057590 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.609148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACG TCTCGCTGCT GCTCCTCTTC GCCGTCGCCG TCGTGCCGTT GGTGCCGACG 
GAGATCGCGC TCATCGGCAT GGGGGTCGCC GCCGCGAACG GTGGCGACCC CTTTCCGCTT
GTGCTGGCCG TGGCGGCAGC GGGCTGCCTG ATCTGCGACA TCGGCCTGTA CCTGGTGGGC
AGGGTCGGTG GGGCGCACCT GCTCGACCGG TTGCGGGCGC GCCCCTCCGC CGACGCGAGC
GCCCGCTGGA TCGGCCGCCA CCTGGACCGG TGCGGAGTGC CGATCCTCGT GCTCGCGCGG
TGGCTGCCCG CGGGCGGCAC CGTCGGCGCG TTGCTGGCGG GCTCGCTGCG CTGGTCGGGT
TCGCGGTTCG TCTCGGCGTC GTTGATCGGC GTGCCGTTGT GGTGCGCCTA CGCGGGCGGG
CTCGGATACC TGGGTGGTGC GCTGGCGGAG CAGTCCCACC TCGGCGTCGT CATCTCCGCG
GTCCTCGCCC TGACCGTGGC CGTCGTGATC GCGGCGATGT TCCGCCGCGC CACGTCCGCC
TCCGCACGGG CATGA
 
Protein sequence
MDDVSLLLLF AVAVVPLVPT EIALIGMGVA AANGGDPFPL VLAVAAAGCL ICDIGLYLVG 
RVGGAHLLDR LRARPSADAS ARWIGRHLDR CGVPILVLAR WLPAGGTVGA LLAGSLRWSG
SRFVSASLIG VPLWCAYAGG LGYLGGALAE QSHLGVVISA VLALTVAVVI AAMFRRATSA
SARA