| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35970 |
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| Symbol | |
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| ID | 8388918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3920697 |
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| End bp | 3922445 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977612 |
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| Product | penicillin-binding protein, beta-lactamase class C |
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| Protein accession | YP_003135379 |
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| Protein GI | 257057547 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.796833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.223324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA GGACCACAGT CTCCCGGATC GCGGCACTGT TCGCGGTCCT GTTGGTGACA
GGAGCGACCG CGATGGCCGC AGGGATGTCG GGCTCCGGCC GATTCGACCG GCCGCAGCAG
GGCTTCGCGC CCGCGTCCAC GGTGCTCGAG GCCGCCGCCC CGGAGGACGT CGGGCTGGAT
CCCAAACCGA TCCGGGAGGC CGAACGGTTG CTCGCGCGCA TGGCGGAGTC CGACTACGTG
GACGGGCATC CGCTGTTCGC GGGGGCCGTG GGCCTGCTGG CACACGACGG GAAGGTCGTC
GACACCTTCG CCGTGGGCAG CGCCGTGCGG TACGCCGACG GGGAAGGCGT CGAACTCCCC
GCCGACGAGC GGGTACCCAT GCGTGAGGAC ACCATCTTCG ACATCGCGTC GGTGACGAAG
CTGTTCACCT CGATCGCGGT GATGCAGCTG GTGGAACGCG GCGAGGTGGT CCTCGACCGG
CCGGTGGCGG CCTATCTTCC GGAGTTCGGG GTGAACGGCA AGCAGGACAT CACCGTCCGG
CAATTGCTCA CCCACACCTC GGGCTTGGAG CCGGGGCTGT TCCTGTGGCG GGACTGGCCC
GACAAGCAGT CCCGTATCAA CGCTGTGCTG GAGGTCGCGC CGCAGCACGA ACCCGGCACC
ACCTACACCT ACTCCGACCT CAACCTCATC ACGCTCGGTG TGCTGGTGGA GCGGGTGACG
GGCGATGAGC TGGACGAGGT GATCGCCGAA CGGATCACCG AGCCGCTCGG CATGAAGGAC
ACGGAGTTCA ACCCTCCCGC GGAGAAGCTC GATCGGATCG CCGCCACCGA ATTCCAGGAG
CAACCGGCGC GCGGTCTGGT CCGGGGCGAG GTACACGACG AGAACGCCTG GTCGTTGGGC
GGGGTGGCCG GCCACGCGGG ATTGTTCTCC ACGGCGCGGG ATCTGAGTGT GCTCGGGCAG
GCGTTGTTGA ACGGCGGCAC CTACGCCGGG GAACGCATCC TCCGTCCGAG CACCGTGTTG
CAGCTGTTCA CGAACTACAA CAGCGAGTTC CCCGACAACT CGCACGGACT CGGTTTCGAA
CTCGACCAGA TCTGGTATAT GGGCGGGCTC ACCTCCCCGT CCACGGCGGG CCACACGGGT
TACACGGGCA CGTCGTTCGT GGTCGACCGG CAGTCGCGCT CGATAGCCGT CCTGCTGACC
AACCGGGTGC ATCCGTCGCG TTCGTGGGGC TCGATCAACC CCGCACGGCA GGCGTGGGCC
ACCGGACTCG CCCGGGCTCT CGCCGTCGAG CCGAAGCACG GTCGACGCGC ATGGTCGTCC
TTCGTCGGCG ACGACTCCAC CGCGACGCTC ACCACCCCGC GACTCGCCCC GCGGGGGCGC
GGAGTCACGG TCACGTTCGA CGCCTTCGTC AACACCGAAC CGAGTGACGT CCTGACGCTG
GAGGCCAGCG TCGATCACGG CCGGACGTGG ACGACCGTGC CCCTGCGCGC CAGGGGTGAG
GGAGCGCCCC GCGGGACGGT GGAGGGCCTT TCAGGAACCG ATCATCGTGC GTGGTGGTCC
GTGCGCGCCA CGATGCCGGC GACCGACGCC GTCACTCTTC GTTGGCGATT CACGACGGAC
GGGAACTACA CCGCGCGAGG GGTCGTCGTC GACGGCATCC GGGTCAACGA CGCGCGGGGG
ACCCTGTTGG ACGGGGAACG CCAGCCACAG CGATTCGACG CGCAGGGGTT TGTCCTGACC
GGCCGCTGA
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| Protein sequence | MRARTTVSRI AALFAVLLVT GATAMAAGMS GSGRFDRPQQ GFAPASTVLE AAAPEDVGLD
PKPIREAERL LARMAESDYV DGHPLFAGAV GLLAHDGKVV DTFAVGSAVR YADGEGVELP
ADERVPMRED TIFDIASVTK LFTSIAVMQL VERGEVVLDR PVAAYLPEFG VNGKQDITVR
QLLTHTSGLE PGLFLWRDWP DKQSRINAVL EVAPQHEPGT TYTYSDLNLI TLGVLVERVT
GDELDEVIAE RITEPLGMKD TEFNPPAEKL DRIAATEFQE QPARGLVRGE VHDENAWSLG
GVAGHAGLFS TARDLSVLGQ ALLNGGTYAG ERILRPSTVL QLFTNYNSEF PDNSHGLGFE
LDQIWYMGGL TSPSTAGHTG YTGTSFVVDR QSRSIAVLLT NRVHPSRSWG SINPARQAWA
TGLARALAVE PKHGRRAWSS FVGDDSTATL TTPRLAPRGR GVTVTFDAFV NTEPSDVLTL
EASVDHGRTW TTVPLRARGE GAPRGTVEGL SGTDHRAWWS VRATMPATDA VTLRWRFTTD
GNYTARGVVV DGIRVNDARG TLLDGERQPQ RFDAQGFVLT GR
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