Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35270 |
Symbol | |
ID | 8388848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3842943 |
End bp | 3844172 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644977544 |
Product | hypothetical protein |
Protein accession | YP_003135312 |
Protein GI | 257057480 |
COG category | [S] Function unknown |
COG ID | [COG4399] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.546332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGACAG TTCTCGCCGA CCTCGCCGCG AACTGGCCCC TCTACGCCGC GATTCCCGTG GTGGCCGCTC TCATCGGCTA CGTCACCAAA CGGGTCGCCA TCGAGATGAT GTTCCGGCCG ATGGAATTCG TCGGCATCAA AGGAACGTTT CTCGGCTGGC AGGGCGTCGT GCCCCGGCAC GGCGGCAGGA TGGCCGCGAC GGCGACGGAC CTGCTCACCC GCAACGTGCT GGACGTCTCC GACGTATTCG CCAGGATCAA CCCTGATCGG CTGCTCCGCG AGATCGAACA ACCCCTGCTG AAGGCCGTCG ACGACATCAC CAGGGAGGTG TTGTCCGAAC ATCATCCGAG GCTGTGGCAG CGGCTCCCAC CGATGGCGCA GGACCTGGTG GTCAAGCACA TCCAGGCGGC CTCACCCCGG CTGTTCCGTC AGGTGATGGA CGAACTGCGG AACAACATCG GCGACATCCT CGACATCAAA CACCTGAGCG TGCAGCGCCT CACCCGGAAC AAGGCACTGC TCGTGAAGTT GATCAGGGAG ACATCGCGCC CCGAAATGGC GTTCATCGCC CGTTCGGGTA TTTATTTCGG GTTCATCCTC GGCATTGTCC AATCGATCGT GTGGGCACTG ACGAAGAACC CACTCGTCAT GCCGATCTTC GGTGCCGCCA TCGGTTTCTT CACCGACTGG CTGGCCATCA AATTGATCTT CGTTCCACGG GACCCGATAC GGTTACCGGG CGGATTCGTC CTACAGGGTC TGTTCCAACG TCGCCGCGCC GAGGTCGCCC GACAATACGG CGACATGATC GCCGGGGAAT TGTTGACGGT GCGGAATCTC ATGGAAGGCA TCTTCGACGG GCCCAAGTCC GACCGGCTGG TGGCGATCGT GCGGAAGCTC GTCGCCGAGG CCATCGACGA GCAGGTGCAA AGCGCGGGCC CGCTGATGCA CGCCACCATC GGGCAACAGC GCCTCGATGA GATGAAGGAC GCTGCGGCCA CCAAAGTCCT CGAACGCCTA CCCGACATCC TCCGCCACGC GGACGGCTAC CTCACCAGGG CGATGGACGT GACCAACATC GTGGAGCAGC GCATGATGCG CATGACGTCG CTGGAGTACG AAGGCCTACT GCGCCCCGCG TTCCGACAGG ACGAGTGGAA ACTCATCGCC GTCGGCGGCG CCATCGGTTT CGTGGTGGGC GAACTCCAGG TCCTGTTGAT GTTGCACTGA
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Protein sequence | METVLADLAA NWPLYAAIPV VAALIGYVTK RVAIEMMFRP MEFVGIKGTF LGWQGVVPRH GGRMAATATD LLTRNVLDVS DVFARINPDR LLREIEQPLL KAVDDITREV LSEHHPRLWQ RLPPMAQDLV VKHIQAASPR LFRQVMDELR NNIGDILDIK HLSVQRLTRN KALLVKLIRE TSRPEMAFIA RSGIYFGFIL GIVQSIVWAL TKNPLVMPIF GAAIGFFTDW LAIKLIFVPR DPIRLPGGFV LQGLFQRRRA EVARQYGDMI AGELLTVRNL MEGIFDGPKS DRLVAIVRKL VAEAIDEQVQ SAGPLMHATI GQQRLDEMKD AAATKVLERL PDILRHADGY LTRAMDVTNI VEQRMMRMTS LEYEGLLRPA FRQDEWKLIA VGGAIGFVVG ELQVLLMLH
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