Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35210 |
Symbol | |
ID | 8388842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3830619 |
End bp | 3835259 |
Gene Length | 4641 bp |
Protein Length | 1546 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977538 |
Product | hypothetical protein |
Protein accession | YP_003135306 |
Protein GI | 257057474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.910685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACT CGATCCGCAA TGTTGGCGAT TTCCTGTCTC CGCACTGGCT CTCCGAGGCG TTTCCGGGCA AGCTCCGGCA GCTGTCGAAG GACTGGCGGG AACGTGCGAC CAAGGGCAAA CACAGCCCGC TGAAGGCATT GTCGACGGTG GCGGGGAAGT TCTTGGCCGC CAAGGCTTTA CTTCCGCGGC CGCACCAGGA CGGATACTCC GAAGCCGTCA CCGAACTACA CATCCTCGTG CTCAAGGCAC TGGGTTTCGA AGCGGCCCCC ACCGAGTTGG AGACTCGGCG TTCGGAGAAC CCGGTGTGGG TGCCGTTGCT GGCGCGTGCC CAGTCGTTGT CGGGGGAGGC CCTGCACGTC CTTCAAGCGG TGCCGGTGGA CGACGTCGAC GACTTGTTCG GCGCTGTCCA AGGAGATACC GACCGGCAGG GAGCTCTGCT CGATCCCATC CGAGTACGTA GCGGCAGCAC TGAGGCCGCG AAAACAGAGG CGGTCGAGTC GGTAAGCAAA GCTGTTCAGC AGCTTTTCCT CACCGAGCAT GCTCCCCGCT TTGTACTGGT GATCGCGGGT GGGTGGCTGC TGCTGTCGGA TGTGGAGCGT TGGGCCGAGG GTCGGTACCT GGCGTTCGAC CTCGACACCG CGTTGTCGCG TGGTGACGAC AAAGCCACCG GTGAACTCGC ATGGATTGCC GGACTGGCGT CGGCGGATGT GCTCGTGCCG TCCGAGGACG GGCACAGCTT GCTCGGTGAG TTCACCGACG ACTCCGTGAA GCACGCCGTC GGCGTGAGCG AGGACCTGCG GGAGGGGCTG CGGCAATCAG TGGAGCTGAT CGCCAACGAG GTGATCCGGA AACGGCGAGC CAAGGGCGAG CCGGTGGAGG GCATCCCCGA GTTGCCGCGC GAGCTCACCA CGCAGTCGCT GCGGTTCCTC TACCGCATTC TGTTCCTGCT CTATGCCGAG GCCCGGCCGG AGCTGGGTAT TCTCCCGGTA GGGGACCCCG ACTACGACGC CGGCTACAGC CTCGATCGGT TGCGAGAGCT GATTCTGCGC CCGCTCACCG GTCCTTCTCG CGACGGCCGC CACCTGCACG ACTCGTTACG CCTGCTGTTC AAGCTGGTCA ACACCGGCCA CCACGCGGGT GAGTCCAACA GCGACGGCCT GGTGTTCGAA CCGCTGCGGG CCGACCTGTT CGATGCCCAG CACGCTTACC ACATCGACAA CGTGGACCTG AGCAACGCGG TCTTGCAACG GGTGCTGGCG TTGCTGCTGT TGGCGAAGCC ATCGAAACGC AAGAGCGGCC AGGCCGGCTA CGTGTCGTAT GCGCAGTTGG GCATCAACCA GCTCGGTGCG GTGTACGAGG GACTGATGGC CTACAGCGGG TTCATCGCCG ATCGGGAGTT GGTGGAGCTT GCCAAGGACG GTGATCCCAC CAAAGGCACG TGGCTGGTGC CGCGCGAGAA GCTGGGTGAC TACGACGAGA AGCACGTGGT GCGTCGGGAA GACCCATTGA CCGGCGAGAA GAGCTTCGTC GTGCACCCGG CGGGCACGTT CGTCTACCGC CTGTCTGGGC GTGACCGGCA GCGCAGCGCC TCGTACTACA CGCCCGAGGT GCTGACTCGC ACGGTGGTGA AGCATTCGCT GGCCGAGCTG ATCAGTGATG ACACGCCCGC GGCCGAGATC CTGGAGTACC GCATCTGCGA GCCCGCGATG GGCAGCGGCG CGTTCCTCAA CGAGACGATC AACCAGCTCG CCGACGAGTA CCTCAAGCGG CGGCAACGCG AGCTGGACAC CACGATCGAC CCGGAGTCAT ACCGTGACGA GCTGCAGAAG GTGAAGGCCT ACCTGGCCTT GCACCGCTGC TACGGCGTGG ACCTGAACGA CACCGCCCGC GAACTGGCGG AGGTATCGCT GTGGTTGAAC GTGATGCACC GCGGGTTGAA GGCGCCGTGG TTCGGTCTGC ACCTGAAGCG GGGAAACTCG CTGATCGGGG CCCGGCGCGC GACCTACGAC TTCACGGCGC TGGGGTGGGC GAAGCAGAGC TGGCTCAAGA CCGTGCCGAC CGACCGCCCA CTGTCCGAAG GGCCGATCGG GGACGGCGAA ATCCACCACT TCCTGCTGCC CGCGGCCGGG TGGGGCGCGG TGAAGGACGC CAAGCAGGCC AAGGAACTCG CGCCGGAGAA GGTCGCGCGG CTCAAGGAGT GGCACAAGGC CGTCACCCGC AAGCCGAGCA AGCAGGAGGT CGAGCGGCTG CGGCGGCTCG CGCGACGGGT GGAGCGGCTG TGGGAGCTGA CCCGGCGACG TATGGAGATC AGCGAACGCG AGGTGGCCCG CAGCATCGAC GTGTGGGGCG CGGAGCTGCC GCAGGAAGCC ACGGGCGTGC CGCGGGAGGA AGTGGAGAAC AAACTCCAGG ACCCCGAGGG GCCGTATCAG CGGCTGCGGT TGGCGATGAA CGCGTGGTGT GCGCTGTTCT TCTGGCCGGT GACCACCGAC ATCGAGCCGC CCGACCTCAC CGAGTGGATC GCCACGTTGG AGGGCCTGCT CGGAGTGGCG GGCAAGGCGA TGCCCGAGGG GTATATGGAG CTGGTGGAAA GCGTGGACAG CTTCCACGAA CTGGCCGACC TCGACGAGCT GGAGAGGACC TACCACGGCA TGCGGGAAGT CACCTTGTTG CATGCCGAAC ACCCGTGGCT CGGCGTGGTG CGGGAGATCA CGCAGCAAGA AGCGTTCTTC CACTGGGAGC TGGACTTCGC GCAGGTGTTC AGCCGAGGCG GCTTCGACCT GCAAGTGGGG AACCCGCCGT GGGTTCGGCC GAAGTGGTTC GACAACGAGA CGCTCGCTGA GTTTGAGCCG TTCTTCGTCT TGCAGAACAA GATTCCTGAC GCAACATTCC GGGTGCGTCG TGCGGAGGTG CTGGCCGATC CGGTGGCAAA GCGGCAGTAC CTCGGAGAAC TCGCATCGTG GTCGGGGTTG AACGAGCACC TGGGTTCATC AGTCGAGCAT CCGGTTCTGT CAGGCATTCA AACCAACCTT TACACGAGCT TCATGGAGCG CTCCTGGCGT TCGATGCGAA CAACAGGGAT CGTCGGTCTG TTGCACCCGG AGAGCCACTT CACAGATCCC AAGGCGGGCA AGCTGCGCGC TGAAACGTAC AAACGACTCA GGCGCCACTG GCAGTTCATC AACGAAGGTC AACTCTTCGC CGATGTTGAC CACCACACGA TTTACGGTGT TCATATTTAT GGTGCTGCCA GCGCTATTCG ATTCCTGCAA ATATCGAATC TTTTGACACC CTCAACGCTT GAAGGTTCCT TGGAGCATGA TGGCTCGGGT GATGCACCGG GTATCCAGTA TCCGGCTGGT GGCTGGGACT TACGGCCTCA TGCCTCTCGG GTAGTAGAGA TCACCGAACG GACTCTTGCT CAGTGGGCCG CGCTCTTCGA CGCGCCAGGG ACGCCCGCTG CGCAAGCTCG TCTGTTGCGA CCGGGCACGA GTGAGCAGCT CGAAGCTCTG GCTGCTATTT CCGATCAGAG AGTTCGGATG GTCGATCTGG ATTACGAGTG GGCTCGAGGT TGGGATGAGG ACAAACTAAA AAAAGATGGA ATTGGGATAT GGGATACAGC TCATCCGGTT TCGTGGAGTG AAGTAATCCT GCAGGGGCCG CAGTTCTCTG TTGCGACACC ATTTGCCAAG GAACCGAACG AGAACTGTAA GAGCAACCTC GACTACTCCG ACTGGGATCT TGAGGAGTTG CCGGAGCGGG TGATCCCGCG CACCAACTAC CAGCGCGCCT GCGACCGCGA CCGCTACGAA GCAGGCCTCA CCCAGTGGAA CGGCCGCCCG TACACGGACT ACTACCGCCT CGCCTGGCGT CGGATGACGC AGTCGGGACT GGAGAGAGCC TTGTCGTCAG CACTTGTGCC GCCTGGTCCT GCCCACGTCG ACGCAGTCCA TACGTTGGCG GGAGGATCCA ACCATGACAC AGCCCTGATT AGTGGCCTCT GGTCCTCGAT CCCGTTCGAC TATCTCGTCA AGGTCAGCGG GGCCAGCAAG GTCAACAAGG AGATGGTCGA CCGCTTCCCC GCGCCGCTCG ACCACCCCGC CGCTCCCTAC CTCCTACTCC GCACGCTGCG CCTGAACTGC CTCACCCGCG ACTACGCGCC GCTGTGGGAG GAGTTGTACG AACCGGCCTT CGCCGAGGAC TCGTGGACCG AGCCGTTCGC CGACTGGCCG ACGCTCGGCG TCACCAAGCG CGAGTGGACG ATGGAGACCT CGCTGCGGTC GGAGTTCGAG CGCCGGGCGG CGTTGGTGGA GATCGACGCG CTGGTGGCCA TCATGCTCGG GCTCACCGCC GACCAGCTCT GCCTCATGTA TCGCGGGCAG TTCGCCGTGC TGCGCAAGTA CGAGTACAAC ATGTACTTCG ACAGCCGCGG CCGCAAGATC GCCAAGGACC ACCACGCACA CGGCGTCAAA CAGCGGCCCG AGGACTTCAA GCTGCTCCAG GCCTACCTCA ACGAGGAGGA CTGCGGCGAC CTCCTTGACC GCTACCAACC CCCGTTCACG CCGGTGGACC GCGAAGAGGA AATGCGCGCC GCCTACGCCG AGTTCACCCG CCGTCTTGCC AGTAAGGAAG GCGCCGAGTG A
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Protein sequence | MYDSIRNVGD FLSPHWLSEA FPGKLRQLSK DWRERATKGK HSPLKALSTV AGKFLAAKAL LPRPHQDGYS EAVTELHILV LKALGFEAAP TELETRRSEN PVWVPLLARA QSLSGEALHV LQAVPVDDVD DLFGAVQGDT DRQGALLDPI RVRSGSTEAA KTEAVESVSK AVQQLFLTEH APRFVLVIAG GWLLLSDVER WAEGRYLAFD LDTALSRGDD KATGELAWIA GLASADVLVP SEDGHSLLGE FTDDSVKHAV GVSEDLREGL RQSVELIANE VIRKRRAKGE PVEGIPELPR ELTTQSLRFL YRILFLLYAE ARPELGILPV GDPDYDAGYS LDRLRELILR PLTGPSRDGR HLHDSLRLLF KLVNTGHHAG ESNSDGLVFE PLRADLFDAQ HAYHIDNVDL SNAVLQRVLA LLLLAKPSKR KSGQAGYVSY AQLGINQLGA VYEGLMAYSG FIADRELVEL AKDGDPTKGT WLVPREKLGD YDEKHVVRRE DPLTGEKSFV VHPAGTFVYR LSGRDRQRSA SYYTPEVLTR TVVKHSLAEL ISDDTPAAEI LEYRICEPAM GSGAFLNETI NQLADEYLKR RQRELDTTID PESYRDELQK VKAYLALHRC YGVDLNDTAR ELAEVSLWLN VMHRGLKAPW FGLHLKRGNS LIGARRATYD FTALGWAKQS WLKTVPTDRP LSEGPIGDGE IHHFLLPAAG WGAVKDAKQA KELAPEKVAR LKEWHKAVTR KPSKQEVERL RRLARRVERL WELTRRRMEI SEREVARSID VWGAELPQEA TGVPREEVEN KLQDPEGPYQ RLRLAMNAWC ALFFWPVTTD IEPPDLTEWI ATLEGLLGVA GKAMPEGYME LVESVDSFHE LADLDELERT YHGMREVTLL HAEHPWLGVV REITQQEAFF HWELDFAQVF SRGGFDLQVG NPPWVRPKWF DNETLAEFEP FFVLQNKIPD ATFRVRRAEV LADPVAKRQY LGELASWSGL NEHLGSSVEH PVLSGIQTNL YTSFMERSWR SMRTTGIVGL LHPESHFTDP KAGKLRAETY KRLRRHWQFI NEGQLFADVD HHTIYGVHIY GAASAIRFLQ ISNLLTPSTL EGSLEHDGSG DAPGIQYPAG GWDLRPHASR VVEITERTLA QWAALFDAPG TPAAQARLLR PGTSEQLEAL AAISDQRVRM VDLDYEWARG WDEDKLKKDG IGIWDTAHPV SWSEVILQGP QFSVATPFAK EPNENCKSNL DYSDWDLEEL PERVIPRTNY QRACDRDRYE AGLTQWNGRP YTDYYRLAWR RMTQSGLERA LSSALVPPGP AHVDAVHTLA GGSNHDTALI SGLWSSIPFD YLVKVSGASK VNKEMVDRFP APLDHPAAPY LLLRTLRLNC LTRDYAPLWE ELYEPAFAED SWTEPFADWP TLGVTKREWT METSLRSEFE RRAALVEIDA LVAIMLGLTA DQLCLMYRGQ FAVLRKYEYN MYFDSRGRKI AKDHHAHGVK QRPEDFKLLQ AYLNEEDCGD LLDRYQPPFT PVDREEEMRA AYAEFTRRLA SKEGAE
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