Gene Svir_34330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34330 
Symbol 
ID8388757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3736265 
End bp3737053 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID644977455 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
Protein accessionYP_003135224 
Protein GI257057392 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAGG TGTCCGGCCT CTACCACCGA TACGGCAAGG GTGACGGCGC ACACCTCGCG 
GTGAACGACC TGACCTTCAC CGTGGAGACC GGGCAACTCG CCTGCATCGT CGGCCCTTCG
GGATGCGGCA AGTCGACGAT GCTGCGCTGC ATATCGGGGC TCATCAAACC CACGGGCGGG
AACGTGTCGT TGCAGGGCAA GCCGGTGGAC GGTGTCCCGG AGGACCTCGC CGTGGTGTTC
CAGGACTACA GCCGTTCGTT GTTTCCGTGG CTGACGGTGC GCAAGAACGT GGAGTTTCCT
CTGCGCTGGC GCGGACTCGG TAAGGCCGAA CGCAGAAAAC GGGCGGAAGA GGCCCTGGAA
TGGGTCAACC TCCCCAACGT GGGCGACAAG TACCCGTGGC AGTTGTCCGG TGGGATGCAG
CAGCGGGTGT CGATCGCCCG CGCCCTGGCC CGCAGGCCCG CGTTGCTGTT GATGGACGAG
CCGTTCGCGT CGGTGGACGC GCAGACGCGG TTCGAGTTGG AGGACCTGCT GCGCAAGGTG
CAAAGGCAGA ACAAGAGCAC CGTGCTGCTG GTCACCCACG ACATCGACGA GAGCGTCTAC
CTCGGCGACC GGGTACTGGT GCTGTCGAAG TCCCCGGCCA CGATCGTGGC CGATCTGACG
GTGGATCTCC CCGACGAACG GGACCAGATC ACGACTCGGG AATCGCCGGA GTTCGTCTCA
CTGCGTGCGG AGGTCGCGCG GCTGTTGCAC GGTGGGGCCA AAGCCCCGGC CGAGGTCGCC
GGCGGTTGA
 
Protein sequence
MLEVSGLYHR YGKGDGAHLA VNDLTFTVET GQLACIVGPS GCGKSTMLRC ISGLIKPTGG 
NVSLQGKPVD GVPEDLAVVF QDYSRSLFPW LTVRKNVEFP LRWRGLGKAE RRKRAEEALE
WVNLPNVGDK YPWQLSGGMQ QRVSIARALA RRPALLLMDE PFASVDAQTR FELEDLLRKV
QRQNKSTVLL VTHDIDESVY LGDRVLVLSK SPATIVADLT VDLPDERDQI TTRESPEFVS
LRAEVARLLH GGAKAPAEVA GG