Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33430 |
Symbol | |
ID | 8388667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3637318 |
End bp | 3639006 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977365 |
Product | ABC-type dipeptide transport system, periplasmic component |
Protein accession | YP_003135134 |
Protein GI | 257057302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.175667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA TCCCCACGGA CGCCGATCGC CGCACGGCTC GGGCGGGTGC CGGGTGGAAC GCCGCGGTGG GAGCCGTGGT CAACCCGTCC CGACGACGTG GCGGCACCCT CCGCCTCGCC TCCTCCGCCG ACGTCGACTC ACTCGACCCC GCGCGGACCT ACTACGTGTG GGTGTGGTTG CTGCAACGGT TGCTCAACCG CACGCTGATG GCCTATCCGA CGGAGGCGGG CCCCGAGGGG CTGACCCCGG TCCCGGACCT CGCCGAGGCA CCCGGAGAGG TCAGCGCGGA CGGACTGACG TGGACCTACC GACTGCGTCC CGACGTGCGT TACGAGAACG GCAGGAAGGT GCGCGCGGCC GACATCCGGC ACGCGGTGCA GCGTGTCTTC GCCCAGGACG TGTTGCCGGG CGGGCCCACC TACCTCATCC CGCTGCTGGA CGACCCGGCC CGGCCGTATC CGGGGCCGTA CCGTGATCCC GACGGCTTAC CCGCGGTCCA CACCCCGGAC GACCGCACGA TCGTGTTCCG ACTCCGCAGC CCGTTCCCGG ACTTCGACCA CCTCATGGCC CAGCCCTGCA CCGCCCCGGT GCCGCAGTGG GCGGACACCG GCGCCCGCTA CGGTGAGGCC CCACTGTGCT CCGGACCGTA CCGGGTGGCC GAGTATCGAG CCGGGTCCCG ACTGCGGTTG GAGCGCAATC CACACTGGGA CCCGGCCACC GACCCGATCC GTCCCGCCCT GCCCGACCGG GTGGAGTTGA CCATCGGCAT GGGGGTCGAC GAACTGGACG ACCGACTGAT CGCCGGGGAG TTCGACATCA ACCTCGAGGG CCGTGGTCTG CAGCACGCGG CGCAGCGACG AGTGTTGGCG GACCCGCTGC TACGGGCGAA CACGGACAAC CCGGAGACCA ACTTCCTGCA GTACATCTCG ATCCAACCGC AGATCCCACC GTTCAACGAC ATACACGTCC GCCGGGCGAT CCAGTTCGCC GCGGACCGGG TGGCCCTCCA GGAGGCCAGG GGCGGGCCGA TCACCGGTGG GGACATCACC ACGGTGCTGT TCCCACCCCG GTTGGCGGCA CACCAGGACC TCGACCTCTA TCCGGCGGGT CCCGATCTGC GTGGCGATCT CGACGCCGCC CGCGCCGAAC TGGCGAGGGC CGGACTGCCG GACGGTTTCT CCGCCGTGAT CGGTACCCAA CGGGGCAAGT TCCGACTGGT GGCCGACGCG CTGGCCGAAT CCGTCGCCCG GGTCGGCATC CGACTGTCGG TGATGGAACT GGACGTGGCC ACCTACTTCA GCCAGGGCGT GGGCTCCCCC GCCACGATCC GCGACCGCTC ACTCGGCCTG GTGGTCACCG ACTGGGGAGC CGATTTCCCC ACCGAGTACG GGTTTTTGAC CCCGCTCGTG CACGGCGAAC AGATCAAACC GGCGGGTGGC AACTGGAACC TGGCCGAGCT GGACGACCCG ACGATCAACA CGTTGATCGA CAGCACCCTC ACCTGCTCCG ACCCCCACCA ACGGGTCGAA CTGTGGCGGA AGGTGGAACG GCGTGTGTTG GAACTGGCGG TGTTCCTCCC GCTGGTCCAC GACAAAACGC TGCATTACCG CAATCCCTGG GTCACCAACG TCTACGTGCA CCCGGCGTTC GGCCTCTACG ACGTGCAAGC CATGGGAGTG GACAGTTGA
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Protein sequence | MSTIPTDADR RTARAGAGWN AAVGAVVNPS RRRGGTLRLA SSADVDSLDP ARTYYVWVWL LQRLLNRTLM AYPTEAGPEG LTPVPDLAEA PGEVSADGLT WTYRLRPDVR YENGRKVRAA DIRHAVQRVF AQDVLPGGPT YLIPLLDDPA RPYPGPYRDP DGLPAVHTPD DRTIVFRLRS PFPDFDHLMA QPCTAPVPQW ADTGARYGEA PLCSGPYRVA EYRAGSRLRL ERNPHWDPAT DPIRPALPDR VELTIGMGVD ELDDRLIAGE FDINLEGRGL QHAAQRRVLA DPLLRANTDN PETNFLQYIS IQPQIPPFND IHVRRAIQFA ADRVALQEAR GGPITGGDIT TVLFPPRLAA HQDLDLYPAG PDLRGDLDAA RAELARAGLP DGFSAVIGTQ RGKFRLVADA LAESVARVGI RLSVMELDVA TYFSQGVGSP ATIRDRSLGL VVTDWGADFP TEYGFLTPLV HGEQIKPAGG NWNLAELDDP TINTLIDSTL TCSDPHQRVE LWRKVERRVL ELAVFLPLVH DKTLHYRNPW VTNVYVHPAF GLYDVQAMGV DS
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