| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33330 |
|---|
| Symbol | |
|---|
| ID | 8388657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3620476 |
|---|
| End bp | 3622353 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644977355 |
|---|
| Product | cell division protein FtsI/penicillin-binding protein 2 |
|---|
| Protein accession | YP_003135124 |
|---|
| Protein GI | 257057292 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTG CACGACCTGG GCCGGGGTGG GCTCGTCGGT GGCGTGCGCT CGCCGTCTGG
CTGGTGCCGT TCGTCGCCGC GATGCTGCTC ACGGCGTGTT CGAACGACGG CGAGGACGAG
GCGCGGAAAG TCCTGTCCTC TTTCCTCGAC TCGTGGCAGA ACGGCACGAT TCCCGGGCAC
GAGGAGGAGT ACCGGGAGCT GACGTCGGGG ATGAAAAACC GCGTTCCCGA TCTCCGTCTG
GATGAACTCG ACGTGGACGG TGATCGTGCG ACCGCTGTGG TCACGGTGAC CTGGCCCCTT
GCTTCCGAGG TGAGCTGGGA GTATGAGACG GCGGTCGAGC TGGTCCGTGC GGACGACACG
TGGCGGGTGG ATTGGTCACC CGCCGTCGTA CAACCGGAGT TGCGGGACGG CGATCGGCTG
GTCGTGCGAC GCGGCGAAGA CGTTCGCGGG TCCATTTTGG ATGCGAATGG GGACCCGATC
ACGAAACCGC GGCCGGTCGT GGTGGTCGGT GTCCAGCCCA GCAAAGTAGT CTCGGCACAG
GAGTTGGCCG ACGCGCTCGG CGCCGTCCTG GAGCCGGACG GGGTCGACAC CACGGGATTG
CCTTCCCGGA TCAGCGAGGC CGACCCGGAT GCCTTCGTCG AGGTCGTCAC GTTGCGCAAG
GAGCGTTACC TCGAAGTCCG GCCGCAGATC CACGACCTTC CCGGAACCGT GTTCCGGGAG
GAGACCCGGG TACTGGCTCC CACCCGATCC TTCGCGCGGT CGCTGCTGGG GACCGTCGGT
CCGGTCACCA AGGAGGACCT CGAGGCCGAG CCCGGCAAGT TCGAGGTGGG GGACCAGAAG
GGGCACGGCG GGCTACAGGA ACGTTACGAC GAACTGTTGC GGGGATCGCC CGAGATCGTG
GTGGCCATCG AGCGCGCGGA AGGCGACCGG GAGCTGTTCC GCGCGGAGGC GAGACCGGGT
GCGGCCGTGC ACACGACACT GGACCCGACT GTGCAGAACG CCGCCGATGC CGCCGTCGCG
GACGCAGAGC ACAACTCCGC TGTGGTGGCC ATCAGGATCT CGGACGGGGC CGTGCTGGCG
GTCGCGAACT CGCCCAGCGC GGGCGCGCAG AACCTCGCGA TGAACGCACA GGTCCCGCCC
GGCTCGACGT TCAAGATCGT CAGTGGCCTG AGCCTGCTCG ATCGCGGTGC GGTCGGTCTG
GACACCCCGG TCTCGTGTCC GGCGACCACG AACGTCGGGG GCCGGGTGTT CAAAAACGCC
TGGGACGGTG GTATCGAGAA CGGGACGTTC CGGGATGCCT TCGCCCAGTC CTGCAACACG
GCGTTCGCCT TGCTGGCACC GAAACTCGGC GTGGACGGAC TGGCGAAGAC CGCGGCGAGC
CTGGGCATCG GCGTCGAGTG GGATCTCGGA GCCGGGGTCT ACACCGGTTC CGTGGCCTCC
GATGCCGACC CGGTGGAACA GGCCGCGGCC GCCTTCGGAC AGGGGAAGAC GATGGTGAGT
CCCATGGCCA TGGCGGCGGC CACCGCGGGG GTGGCCCGCG GACAGTGGCA ACAGCCCTCC
CTGGTGACCG AGCCGGCACC CGAAGCCCCG GCCGGGGACG GACCGAAGTT GAACGAGGAG
TCGGTGCGCG CGTTGCACAC CGCGATGCGA GCGGTGGTCA CGGACGGCTC GGGACGGCAA
CTGAGCTCCG TGCGGGGTGA CCCGGTCTAC GGAAAGACGG GAACGGCCGA GTACGGGACG
GAGACCCCTC CGCGCAGCCA CAGTTGGTTC ACCGGTTGGC GGGGAGACGT CGCTTTCGCG
GTCTTCGTCG AGGACGGCGG TAACGACGTC AGTTTGGCGA TCGACGTGAC CGAACGGTTC
CTGAACGGAT TCCAATAG
|
|---|
| Protein sequence | MTTARPGPGW ARRWRALAVW LVPFVAAMLL TACSNDGEDE ARKVLSSFLD SWQNGTIPGH
EEEYRELTSG MKNRVPDLRL DELDVDGDRA TAVVTVTWPL ASEVSWEYET AVELVRADDT
WRVDWSPAVV QPELRDGDRL VVRRGEDVRG SILDANGDPI TKPRPVVVVG VQPSKVVSAQ
ELADALGAVL EPDGVDTTGL PSRISEADPD AFVEVVTLRK ERYLEVRPQI HDLPGTVFRE
ETRVLAPTRS FARSLLGTVG PVTKEDLEAE PGKFEVGDQK GHGGLQERYD ELLRGSPEIV
VAIERAEGDR ELFRAEARPG AAVHTTLDPT VQNAADAAVA DAEHNSAVVA IRISDGAVLA
VANSPSAGAQ NLAMNAQVPP GSTFKIVSGL SLLDRGAVGL DTPVSCPATT NVGGRVFKNA
WDGGIENGTF RDAFAQSCNT AFALLAPKLG VDGLAKTAAS LGIGVEWDLG AGVYTGSVAS
DADPVEQAAA AFGQGKTMVS PMAMAAATAG VARGQWQQPS LVTEPAPEAP AGDGPKLNEE
SVRALHTAMR AVVTDGSGRQ LSSVRGDPVY GKTGTAEYGT ETPPRSHSWF TGWRGDVAFA
VFVEDGGNDV SLAIDVTERF LNGFQ
|
|---|
| |