Gene Svir_32230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32230 
Symbol 
ID8388547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3495394 
End bp3495900 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID644977250 
Producthypothetical protein 
Protein accessionYP_003135022 
Protein GI257057190 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.134022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCA TCGAGTTCGA GCCGGTGACC GACGCCGACC GCGAGGTCGT CGCGCAGCAA 
TTGGGGAGAC CGCCTCGCGC GCTTCGCGCG ATCGCGGCCC GTTGCCCCAG TGGCCATCCC
TCCGTAGTAC AGACCAATCC TCGGCTCGAG GACGGCACGC CGTTTCCCAC GCTCTATTAC
CTGACCTGCC CCACGTTGAC GTCCATGGTG GGGCGACTGG AAGCGTCCGG GATCATGCGC
GAGATGACGA ACAGGCTCGC CGAGGACGCC GAGTTGGCGG CCGCGTATCG GCGGGCGCAT
GAGTCGTACC TCGCGCAGCG GGACGCCATC GAACCGTTGG GCCATCAGGT CACCGCGGGC
GGTATGCCGA CCCGGGTCAA ATGCCTCCAC GTCCATCTTG CACACACACT CGCCTGTGGC
CCTGGTGTGA ACCCTTTCGG TGACGAGACT CTCCGCCTTG TGCGGGAAGC AGGATGGCCG
CTCGGTGATT GTGCGGAGTC GCATTAG
 
Protein sequence
MSPIEFEPVT DADREVVAQQ LGRPPRALRA IAARCPSGHP SVVQTNPRLE DGTPFPTLYY 
LTCPTLTSMV GRLEASGIMR EMTNRLAEDA ELAAAYRRAH ESYLAQRDAI EPLGHQVTAG
GMPTRVKCLH VHLAHTLACG PGVNPFGDET LRLVREAGWP LGDCAESH