Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31340 |
Symbol | |
ID | 8388458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3399210 |
End bp | 3399974 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977163 |
Product | predicted metal-dependent membrane protease |
Protein accession | YP_003134936 |
Protein GI | 257057104 |
COG category | [R] General function prediction only |
COG ID | [COG1266] Predicted metal-dependent membrane protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.249582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.188153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCGGA TGTCGAAGTC GGACGACCGT CAACTCACGC TTTCTGGTGA GGAGCTGTCA GGCCGCGGAC GGTCCCGTTC CCGAACCGAC GTGCCGAACG GCCGGTTCCA CCGGGTCGAC CTGGTGGTGG TGTTCGCGGC GGGGATCGTG CTGGGGTTTG AGACCGTCGT CGAACTCGCC TCCGGGCCGT TGCGGTCGGC GGGGATGTCA CCGTTGCTCG CCGACGCGAT CGGATGGGGT GTCGCCAACG GGCTCATCCT GGTGATCGCG TTGGGCATCA CGCGTCTCCG CTACGGCCGG GTGGCTTCGC CACTGCGGTT GCATCGCCCC ACGCTCCGCA CCACGCTCGT GGGTCTTGCG GGTGCGGTCG GGCTGGCAGC GATCAATTTC GCCGTCATGT TCCTCCCGCT CGATGGTGGT CCCGCTGGTG GGATCGCGGA CGGGCCCGCG TGGGCGCAAC TGGTGTTCGC GGTGCTGTTC GGTGTCGTGG TCACCGGTTT CTACGAGGAA GTGGTCTACC GCGGTGTGCT CATGACCGGG CTGAGTGACC GGTTCGGGTC GAAGGCGGGA CTGGTGCTGT CGTCGGTCGC GTTCAGCCTC GCCCACCTGC CGCGGGCATA CAACACGGTG ACGGGTCTGC TCGGTGGTCT GTACCTCGGC TGGCTGTACC GGAGGTACGA CTCGCTCAAC GTGGTGATCA TCGCGCACGG TCTCGGCAAC GCCTTGCTCG GCGTCGCCGC GGCGGCGGCC AACGTCTCGC CCTGA
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Protein sequence | MVRMSKSDDR QLTLSGEELS GRGRSRSRTD VPNGRFHRVD LVVVFAAGIV LGFETVVELA SGPLRSAGMS PLLADAIGWG VANGLILVIA LGITRLRYGR VASPLRLHRP TLRTTLVGLA GAVGLAAINF AVMFLPLDGG PAGGIADGPA WAQLVFAVLF GVVVTGFYEE VVYRGVLMTG LSDRFGSKAG LVLSSVAFSL AHLPRAYNTV TGLLGGLYLG WLYRRYDSLN VVIIAHGLGN ALLGVAAAAA NVSP
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