Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31190 |
Symbol | |
ID | 8388443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3386622 |
End bp | 3387668 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644977148 |
Product | ABC-type spermidine/putrescine transport system, ATPase component |
Protein accession | YP_003134921 |
Protein GI | 257057089 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.264527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.660761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACGG TCACCGGCCT CACCGTGCGC TACGGCGATT TCGTGGCGGT ACGGGACGCT CATCTGGAGA TCGCCGACGG TGAGGTGTTG GCACTGCTGG GCCCGTCGGG ATCGGGTAAG TCGACGTTGC TGCGGGCGAT CGCGGGACTG GAGCCCGCGG TGACCGGCAG CGTGTGTTGG GACGGTGACG ACCTGTCCCG GGTGCCCGTG CACCGCCGGC ACTTCGGCTT GGTGTTCCAG GACGGTCAGC TCTTCCCCCA CCGGGACGTG GCGGGCAACA TCGCGTTCGG GCTGCGGATG CAAGGGATGG CGCGGGAGGC TCGCAAGGAG CGTGTGCGCA CCTTGCTGGA GCTGGTGGGG CTGTCCGGAT ACGAGCGCCG CAAGATCACC GCGCTGTCCG GTGGTCAGGC GCAGCGCGTG GCGTTGGCCC GAGCGCTCGC ACCGCAGCCG AGGTTGCTGC TGCTCGACGA GCCGCTGTCC GGCCTCGACG CGGAACTGCG CGAACAACTC GCGATCGAGG TCACCGAACT GTTGCGCCGC ACCAAGACGA CCACGCTGCT GGTCACCCAC GACCAGGAGG AGGCGTTCAC CCTCGCCGAC CGGATCGCCG TGCTCGACGA GGGAGTGATT CGGCAGGCAG GTGATGTGCT CGACGTGTGG CGCCGTCCCG CGGACGAGCG GGTCGCCCGG TTCCTCGGTG TGACGACGTT CTTGCCCGGT CGCGCGGAGC GGGGACGGGT TCGGTGCGTG CTCGGGGAGG TGTCGCTGCC CGGGGTCGCC GACGGTGACG TGTGTGTGGG CCTGCGTCCC GGCGCTGTGC GGGCCGTGGA GCTCGGTCGG GACGAACGCG GCGGTCCGGG GGAGTCCGTG CAGGGTGAGG TGCTGGCTCG GGTGCACCGC CGCGACCATG TCCGACTGTC TGTGCGGCCC GACGTGGATT TGCCGGAGGT GTCGGCCGTG GCGGCGATGA CCAGCCGGGC CGTGCCGGGG GATCGGGTGG CCTTGTCGCT CGACGCCGAC GGCGTGGCCC TCGTGGGGGC GGGATGA
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Protein sequence | MLTVTGLTVR YGDFVAVRDA HLEIADGEVL ALLGPSGSGK STLLRAIAGL EPAVTGSVCW DGDDLSRVPV HRRHFGLVFQ DGQLFPHRDV AGNIAFGLRM QGMAREARKE RVRTLLELVG LSGYERRKIT ALSGGQAQRV ALARALAPQP RLLLLDEPLS GLDAELREQL AIEVTELLRR TKTTTLLVTH DQEEAFTLAD RIAVLDEGVI RQAGDVLDVW RRPADERVAR FLGVTTFLPG RAERGRVRCV LGEVSLPGVA DGDVCVGLRP GAVRAVELGR DERGGPGESV QGEVLARVHR RDHVRLSVRP DVDLPEVSAV AAMTSRAVPG DRVALSLDAD GVALVGAG
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