| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30910 |
|---|
| Symbol | |
|---|
| ID | 8388415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3353634 |
|---|
| End bp | 3354293 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644977120 |
|---|
| Product | predicted amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003134893 |
|---|
| Protein GI | 257057061 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.833734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCGG CGGTACTGGA TCTGTTGTTG CCGTCGTCCT GCGCCGCCTG CGGCAGATTG
GGTGCCGCCG CGTGCGAGGG CTGTCTGGCC GGACTGGGCC GCGGGCCGGT CGTCGTGCGG
CCCGGCGTGG CGGCGTTGAG CGAGCACGCC GGTGCCGCAA GAGAGCTCGT ACTCGCCTAC
AAGGAACGAG GCAGGCGTGA GCTGGCCGCG CCGTTGGGGC GGGCGTTGGG ACGGGTTGTG
CCGACGTTGG CGCAGGCCAG GCCGGATTCC GGTGGTACCT GGTGGCTCGT TCCCGTCCCG
TCGCGGCCCT CGGCCTCACG GGTCCGCGGT GGTCCGCACG TCACGGCGTT GGCACGGTGG
TGCGCCGCCG AATTGGCCGA GCGTGGGCAG GCCGCGGCCG TGGCCCCCGC CCTGCGGCTG
TCGGGGCGAG TCCGGGACGC CGTGGGGTTG GGACGTGCCG AGCGGGTGGC CAACCTGTCC
GGGCGTGTGG GTGTGGTCCC CGCCGGTGTG CCCGCACCGG GAACGCCCGT CGTCCTGCTC
GACGACGTCG TGACGACGGG GGCGACCCTG GACGCCTGCG CTCGTGCGTT GAGCCGGGCC
GGGGTGCGGG TGCGGGCGGC ACTGACGCTC ACGGCGGCGC CGGCGCCGCG GAGGTCTTGA
|
|---|
| Protein sequence | MGAAVLDLLL PSSCAACGRL GAAACEGCLA GLGRGPVVVR PGVAALSEHA GAARELVLAY
KERGRRELAA PLGRALGRVV PTLAQARPDS GGTWWLVPVP SRPSASRVRG GPHVTALARW
CAAELAERGQ AAAVAPALRL SGRVRDAVGL GRAERVANLS GRVGVVPAGV PAPGTPVVLL
DDVVTTGATL DACARALSRA GVRVRAALTL TAAPAPRRS
|
|---|
| |