Gene Svir_30830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30830 
Symbol 
ID8388407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3344099 
End bp3344869 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID644977112 
ProductrRNA methylase 
Protein accessionYP_003134885 
Protein GI257057053 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGACA AGCAGGCGAC CTCGCCGAAG GACCGCTTCC TGACCGTGTA CGGGCGCAAA 
CCCGTGTTGG AGGCTTTGCG CGACCCGGCC CTCGACGTCG ACAAAGTGAT CATGGCCGAC
ACCGTTCGTG GTCCTGCGAT CGCCGAGATC CAGCGCGCCG CCGAAGCCCG GGGCGTGCCC
GTGCGGCGCG CCAGTGCCCA CCGGGTGAAG GTGCTGGCGG GTAACGGCAA GCAGGATCAG
GGCGTGCTCG CCGACGTCGT GGCTCCGCGG ATGCGACCGC TCGCGGCGGC GCTGGAGGGC
CGTACCCCGC CGTCGCCGTT GCTGGTGTTG GACGGCATCA CCACGTCCGC GAACGTCGGC
ATGATCCTGC GTACCGCCAC GGCCGCCGGG ATTCCCGGCG TGGTGGTGCC CCGCCGCGGG
GTGGCCGCAC TCGATCCGCT GGTGGTGAAG GCGTCGGCCG GGGTGGCGTT TCGCGCTCCT
GTGTTGCGGT GCGCGACGGC GGTGGAGGCC GTCGAGTCGC TCGTCGAGGT CGGCTACACC
GTTTACGCGC TCGGCGCACG TGCCGACGCG GAGAGTACGT CGTTGTTCGA CACGGATGTC
CCGTCGCGGG TGGCGTTCGT GCTCGGCGGG GAGACCGAGG GGGTCAGCGC CGCCGTGGCG
GATCTGGTGG CGGGCTGGGT GTCGATCCCG ATGCCGGGTG ACGTGGAGTC GTTGAACGTG
TCGGCGGCCG CGGCGGTGGT GTGTTTCGAC CTGGTTCGCC GCGGCCGGTG A
 
Protein sequence
MGDKQATSPK DRFLTVYGRK PVLEALRDPA LDVDKVIMAD TVRGPAIAEI QRAAEARGVP 
VRRASAHRVK VLAGNGKQDQ GVLADVVAPR MRPLAAALEG RTPPSPLLVL DGITTSANVG
MILRTATAAG IPGVVVPRRG VAALDPLVVK ASAGVAFRAP VLRCATAVEA VESLVEVGYT
VYALGARADA ESTSLFDTDV PSRVAFVLGG ETEGVSAAVA DLVAGWVSIP MPGDVESLNV
SAAAAVVCFD LVRRGR