Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30190 |
Symbol | |
ID | 8388343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3268945 |
End bp | 3270204 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977048 |
Product | aminotransferase |
Protein accession | YP_003134821 |
Protein GI | 257056989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.168399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGC TTTCCCCGAT CCTCAAGCAG GCCACACCGG TCGTCGTCGA TCACGGCGAA GGTGCATACC TCTACGACAC CGACGGACGT CGCCACCTCG ACTTCACCGC GGGCATCGGC GTCACCAGCA CCGGCCATTG CCACCCCCGC GTGGTGCGCG CCGCGCAGGA ACAGATCGGC AAGCTGATCC ACGGCCAGTA CACCACCGTC ATGCACCGTC CTCTGCTCGA ATTGAGCGAG CGTCTCGGCG AGGTCCTGCC GAACGGACTC GACTCGCTCT TCTTCGCCAA TTCGGGCAGC GAGGCCGTCG AGGCCGCCCT CCGGCTGACC CGTCAGGCCA CGGGCAGGCC CAACGTCGTC GTGTTCCAGG GCGGCTTCCA CGGCCGCACC GTGGCGGCGG CGTCGATGAC CACCTCCGGC ACTCGGTTCA GCGCCGGGTT CTCACCGTTG ATGGGCGGCG TGCACGTGGC CCCGTTCCCC AACGCCTTCC ACTACGGCTG GGACGAGAGG ACCACCACGG AGTTCGCGCT GCGGGAACTG GATTACCTCT TCGCCACCCA GACCTCACCG CAGGAGACGG CCGCGTTCTT CATCGAACCG ATGCTCGGCG AAGGCGGTTA CGTACCCGCC AATACCGAGT TCTTCGCCGG CTTGCGACGC CGCGCCGACG AACACGGCAT CCTGCTGGTG ATCGACGAGA TCCAGACCGG CTTCGGCCGG ACCGGGAAGT TCTGGGGACA CCAGCACTTC GACGTCCGAC CCGACGTCCT CCTCATCGCG AAGGGACTGG CCAGCGGTTT CCCGTTGTCG GGCATCGCCG CGTCGAAGGA GCTGATGAGC AAGGCCTGGC CCGGTTCGCA GGGCGGCACC TACGGGGGCA ACGCCGTGTC GTGTGCGGCG GCCATCGCCA CCCTCGACGT CATCGCCGAG GAGAACCTCG TCGAGAACGC GGCCGCGCGG GGCAAGCAGT TGCTCGACGG CGCGCGGGCG ATCGGCGAGA AGACCCCGGG CATCGGCGAC GTGCGCGGCC TCGGCCTGCT GGTGGGTTCG GAGTTCGTCA CATCCGACGG CAAGCCCGAC GCCGCGACGG CGCAGGCTGC GCAGCAGGCC GCCGCGCAGA AGGGACTGCT CCTGCTCACC TGCGGACCGT TCATGAACGT CGTACGGATG ATCCCGCCCC TGGTCGTGAC CGCCGAACAG GTGGACGAGG CGCTGGAGAT CTGGGCCGAC GTCGTCGCAT CGGTGACCAC CGGCTCCTGA
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Protein sequence | MAQLSPILKQ ATPVVVDHGE GAYLYDTDGR RHLDFTAGIG VTSTGHCHPR VVRAAQEQIG KLIHGQYTTV MHRPLLELSE RLGEVLPNGL DSLFFANSGS EAVEAALRLT RQATGRPNVV VFQGGFHGRT VAAASMTTSG TRFSAGFSPL MGGVHVAPFP NAFHYGWDER TTTEFALREL DYLFATQTSP QETAAFFIEP MLGEGGYVPA NTEFFAGLRR RADEHGILLV IDEIQTGFGR TGKFWGHQHF DVRPDVLLIA KGLASGFPLS GIAASKELMS KAWPGSQGGT YGGNAVSCAA AIATLDVIAE ENLVENAAAR GKQLLDGARA IGEKTPGIGD VRGLGLLVGS EFVTSDGKPD AATAQAAQQA AAQKGLLLLT CGPFMNVVRM IPPLVVTAEQ VDEALEIWAD VVASVTTGS
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