Gene Svir_29690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29690 
Symbol 
ID8388293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3207507 
End bp3208553 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID644977000 
Producthypothetical protein 
Protein accessionYP_003134774 
Protein GI257056942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.388142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG TGGCCGACAC ACGTGTCGAG GTGTCCGTGG TCCCGGGTGA GTCCCTGCAG 
GCGGTGCTCG ACGACGCCGA ACCGGGAACG GTGCTGCGGC TCGCCGAGGG CACGTACGAG
GGCAGTCTCT CCATCACCAC GCCGGGGGTG CGGCTGGTGG GGGCGGGTGC GGGACGCACG
GTGATCGTCC CCGGTCCGGT GGCGCCGACG ACGATCCCGC CGTTGCACGA CGCCCCCGAG
GGCGTGGTCA GCGGCATAGC GGTCCACGCG GTGTCGGACG TGGTGCTCGA GGGCCTGACG
GTACGCGGGT TCAGCGGTGC GGGCGTGTAC GTGCACAGTG GCACGGACGT GCGGTTGGAT
GACGTCGAAG CCGATGCCAA CCTGGTGTGG GGACTGTATC TGCGGGAGTC CGGTGGGCTG
ACGGTGCGGC GCTGCCGCGC GAGTGGGAGT CAGTACGCCG GCATCGCGTT CGCGTTCTGT
TCCGAGGCCG AGGCGGTCGT GTCCGAGAGC GACTGTTCTG CGAACGCGTT CGGCGTGTTC
GTGGACAACT CCAGTCGCGT GCGCGTGTTG CGCAACCGCT GTCACGGCAA CGCGGCGGGC
ATCCTCCTGC TGCACCAGAC CTATGAAGGG GAGCTGCCGG GCGGGGTGCG GGACTGCCTG
GTGGCCGACA ACGAGGTCTT CGGCAACACC CTCGCCGCGG GTGGTGACGC CCCGGACGCT
CTCGGGGCCG CGGGGCCGCC GATCTCCGGG GTGGGCATCG CCGCCATCGG GGTCGAGCGG
GTCGCGGTGG TGGGCAACCG TGTGTACGAC AACCGTCCTT CCGGCCCGTC GGTGATGCCG
GGGGCCCTGG TGCTCGCGAG TTCGGCGGAC TGGGGCGGTT CCGACTCGGT GGACAACTCC
TTCGAGTGGA ACACCGTCAC CGGCAACGAA CCGTTCGACG CGTTGATCGG CACGGACCCC
GGCGCACAGC GATTCCGCAA CAATGTCGTC GGCTCCTCAC AACCCGAGGG ACTGTTCGAC
GGACACGGAC CACAGGGGAC GGTATGA
 
Protein sequence
MSSVADTRVE VSVVPGESLQ AVLDDAEPGT VLRLAEGTYE GSLSITTPGV RLVGAGAGRT 
VIVPGPVAPT TIPPLHDAPE GVVSGIAVHA VSDVVLEGLT VRGFSGAGVY VHSGTDVRLD
DVEADANLVW GLYLRESGGL TVRRCRASGS QYAGIAFAFC SEAEAVVSES DCSANAFGVF
VDNSSRVRVL RNRCHGNAAG ILLLHQTYEG ELPGGVRDCL VADNEVFGNT LAAGGDAPDA
LGAAGPPISG VGIAAIGVER VAVVGNRVYD NRPSGPSVMP GALVLASSAD WGGSDSVDNS
FEWNTVTGNE PFDALIGTDP GAQRFRNNVV GSSQPEGLFD GHGPQGTV