Gene Svir_29610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29610 
Symbol 
ID8388285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3199686 
End bp3200504 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content60% 
IMG OID644976992 
ProductATP synthase F0 subcomplex A subunit 
Protein accessionYP_003134766 
Protein GI257056934 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCG GCCGGGAGAA CTCGGAAGGA GCCCAGTTGG GCGCGCTGGT ACTAGCCGCA 
GGCGACGAAT TCGTGCCGCC GACGGCGGAA GCTTTCAATC TGCCGCCGAT CTTCGGCTGG
GTCACCAAAC CCATGCTGCT CGCGGTGCTC TCGGTCATCA TCATCGTGGC ATTCTTCCTG
CTCACCACCA GGAAGATGAG CATCGTGCCC GGCAAGGCGC AGTTCCTGGC CGAGTCGCTG
TACAACTTCG GGCGCAACAA CATCGCTCGG GAACAGATCG GCACGGCCGA CTTCCTCCGT
TTCGTGCCGC TCATTCTGAG CCTGTTCACC TTTATCTTGG TGAACAACCT GTTCGGGCTC
GTGCCTTTCC TGCAGTTCCC GACGATGTCG CACATCGGGT TCCCGCTGGC TCTTTCGGTG
CTGGTGGTGT ATCCCGTGTA TCACTACGCG GGATTCCGGA AGCACGGGTT CGCCGGATAC
CTCAGGAACC AGCTGGTACC GCCGGGCGCG CCGAAGTTTG TCTACATCCT GCTGACCCCG
ATCGAGTTCT TCACCAAGTT CGTGATGAAC CCGATCACGC TGGCGATCCG AGTGTTCGCC
GCGATGTTTG CGGGCCACCT GCTCATCATG CTGTTCGGGA TCTCGGCCGA GTTCCTGTTG
CTGCATGGGG AGGGCCTGCT GAAGGCGATT TCCGCGTTCT CGTTCGCGGG TGCCTTGGCG
ATTACCTTCA TCGAGGCTCT CATCATGGTG ATCCAGGCGT TCATCTTCGC GTTGTTGTCG
GCCAACTACA TTGGGGCGGC TTTGGCCGAG GAACACTGA
 
Protein sequence
MNAGRENSEG AQLGALVLAA GDEFVPPTAE AFNLPPIFGW VTKPMLLAVL SVIIIVAFFL 
LTTRKMSIVP GKAQFLAESL YNFGRNNIAR EQIGTADFLR FVPLILSLFT FILVNNLFGL
VPFLQFPTMS HIGFPLALSV LVVYPVYHYA GFRKHGFAGY LRNQLVPPGA PKFVYILLTP
IEFFTKFVMN PITLAIRVFA AMFAGHLLIM LFGISAEFLL LHGEGLLKAI SAFSFAGALA
ITFIEALIMV IQAFIFALLS ANYIGAALAE EH