Gene Svir_29450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29450 
Symbol 
ID8388269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3185775 
End bp3186548 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID644976976 
Productenoyl-CoA hydratase/carnithine racemase 
Protein accessionYP_003134750 
Protein GI257056918 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACT ACGAACACGT TCTCGTCACA CGCGAGGACG ACACCGTGAC GATCACCATG 
AACCGGCCCG CGCGGCGTAA TGCGCTGTCC GAGCCACACC TGCGGGAGTT GCTCGCCGCT
TTCACCGAGG TGGGGCACAG CGATGCCACG GGCATCGTGT TGGCCGGTGC GGGGCCGGTG
TTCTCCGCCG GCCACGACTT CGCCGACGTC GCCGCGCGGG ATCTGACGGG GGTGCGGGAG
CTGTTGCGCC TGTGCACCGA GCTGATGCGG ACGATGCAGT CGGTGCCCCA GGTGGTGCTG
GCTCGCGTGC ACGGTCTCGC GACGGCGGCG GGGTGTCAGC TCGTGGCGTC GTGCGATCTC
GCGGTGGCCG GGGAGTCGGC GGGATTCGCG CTTCCCGGGG GGAAGGGCGG CTGGTTCTGT
CACACCCCGG CGGTGCCGGT GGCGCGGTCC GTGGGACGTA AGCGGCTCAT GGAACTGGCC
TTGACCGGTG ACACCATCGA CGCGGCGACG GCGTTGGAAT GGGGGCTGGT CAACCGTGTG
GTGCCCGACG CGGAGTTGGA CGACGCGGTC GCCGATCTCC TCGGACGTGC CACGCGGGGT
AGTCGGGCGG CGAAGGCGCT CGGCAAGCAG ACGCTGTATG CCCAGCTGGA CCGCCCGGAA
CAGGATGCGT ACGCCATCGC GCTCGAAGTG ATGGCGGCGG CGTCGCAGCT GCCGGGCGCA
CGTGAGGGGA TGGCGGCGTT CTTGGAGAAG CGAACGCCCG AATGGCCGGA CTGA
 
Protein sequence
MGDYEHVLVT REDDTVTITM NRPARRNALS EPHLRELLAA FTEVGHSDAT GIVLAGAGPV 
FSAGHDFADV AARDLTGVRE LLRLCTELMR TMQSVPQVVL ARVHGLATAA GCQLVASCDL
AVAGESAGFA LPGGKGGWFC HTPAVPVARS VGRKRLMELA LTGDTIDAAT ALEWGLVNRV
VPDAELDDAV ADLLGRATRG SRAAKALGKQ TLYAQLDRPE QDAYAIALEV MAAASQLPGA
REGMAAFLEK RTPEWPD