Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29130 |
Symbol | |
ID | 8388237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3158608 |
End bp | 3159387 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644976944 |
Product | metal-dependent hydrolase, beta-lactamase superfamily III |
Protein accession | YP_003134718 |
Protein GI | 257056886 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.837765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTGATCG TGCGACTGAC CATCCTCGGC TGTTGTGGCA GCATCCCCGG TCCCGATCAG GCCGCGTCCG GCTACCTGCT GGAGGCCGAC GGGTTCCGGT TGGGCCTGGA CCTCGGTAAC GGCACGTTGG CGCGCCTGCA GACGGTGTGC GACCCGTTCG AGCTGAACGC GCTCGTCCTG TCGCACCTCC ATCCGGACCA TTGCGCCGAT TTCAGCGCTC TCACCGTGTT ACGTCGCTAC CATCCGAATC CGCCTTACGA TCCGCGTCGG CACAGACTGC CCGTCCATGC CCCCGCCGAG GCCCCGACCC GGTTGGCCAA CGCGTACGCC CCTCACGAGG CGGAGCGTCA GGAGACCGAC CTGTCGGACG TGTTCGACTT CCGTACGTTG AGCCCCGAAC CGCGGCGCAT CGGCCCGTTC ACGGTCACCC CGGTACCGGT TCTGCATCCC ACCGAGTCGT TCGGGGTGCG GATCACGTAC GGCGACGTCA GCTTCGCCTA CACCGGGGAC ACGGGGCTGT GCGCCGCTCT CGACGAGCTC GCCGACGGCG TCGACGTGTT GCTGTGCGAG GCGAGCTGGA CCAGCGGACC CGACCGGCCC GACGGGCTGC ATCTGTCCGG CGCGCAGGCG GGGGAGCTCG CCGCGCGGGC GAGGGTGGGA CGGCTGCTGC TCACGCACAT CCCACCGTGG TCGGACGGCG ACGCGATCCT CGCCGAGGCC GAGGCGGCGT TCGACGGCCC CACGGAACGC GTGACCCAGG GGGCCGTGTA CGAGTTCTAG
|
Protein sequence | MLIVRLTILG CCGSIPGPDQ AASGYLLEAD GFRLGLDLGN GTLARLQTVC DPFELNALVL SHLHPDHCAD FSALTVLRRY HPNPPYDPRR HRLPVHAPAE APTRLANAYA PHEAERQETD LSDVFDFRTL SPEPRRIGPF TVTPVPVLHP TESFGVRITY GDVSFAYTGD TGLCAALDEL ADGVDVLLCE ASWTSGPDRP DGLHLSGAQA GELAARARVG RLLLTHIPPW SDGDAILAEA EAAFDGPTER VTQGAVYEF
|
| |