Gene Svir_29130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29130 
Symbol 
ID8388237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3158608 
End bp3159387 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID644976944 
Productmetal-dependent hydrolase, beta-lactamase superfamily III 
Protein accessionYP_003134718 
Protein GI257056886 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.837765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGATCG TGCGACTGAC CATCCTCGGC TGTTGTGGCA GCATCCCCGG TCCCGATCAG 
GCCGCGTCCG GCTACCTGCT GGAGGCCGAC GGGTTCCGGT TGGGCCTGGA CCTCGGTAAC
GGCACGTTGG CGCGCCTGCA GACGGTGTGC GACCCGTTCG AGCTGAACGC GCTCGTCCTG
TCGCACCTCC ATCCGGACCA TTGCGCCGAT TTCAGCGCTC TCACCGTGTT ACGTCGCTAC
CATCCGAATC CGCCTTACGA TCCGCGTCGG CACAGACTGC CCGTCCATGC CCCCGCCGAG
GCCCCGACCC GGTTGGCCAA CGCGTACGCC CCTCACGAGG CGGAGCGTCA GGAGACCGAC
CTGTCGGACG TGTTCGACTT CCGTACGTTG AGCCCCGAAC CGCGGCGCAT CGGCCCGTTC
ACGGTCACCC CGGTACCGGT TCTGCATCCC ACCGAGTCGT TCGGGGTGCG GATCACGTAC
GGCGACGTCA GCTTCGCCTA CACCGGGGAC ACGGGGCTGT GCGCCGCTCT CGACGAGCTC
GCCGACGGCG TCGACGTGTT GCTGTGCGAG GCGAGCTGGA CCAGCGGACC CGACCGGCCC
GACGGGCTGC ATCTGTCCGG CGCGCAGGCG GGGGAGCTCG CCGCGCGGGC GAGGGTGGGA
CGGCTGCTGC TCACGCACAT CCCACCGTGG TCGGACGGCG ACGCGATCCT CGCCGAGGCC
GAGGCGGCGT TCGACGGCCC CACGGAACGC GTGACCCAGG GGGCCGTGTA CGAGTTCTAG
 
Protein sequence
MLIVRLTILG CCGSIPGPDQ AASGYLLEAD GFRLGLDLGN GTLARLQTVC DPFELNALVL 
SHLHPDHCAD FSALTVLRRY HPNPPYDPRR HRLPVHAPAE APTRLANAYA PHEAERQETD
LSDVFDFRTL SPEPRRIGPF TVTPVPVLHP TESFGVRITY GDVSFAYTGD TGLCAALDEL
ADGVDVLLCE ASWTSGPDRP DGLHLSGAQA GELAARARVG RLLLTHIPPW SDGDAILAEA
EAAFDGPTER VTQGAVYEF