Gene Svir_27810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27810 
Symbol 
ID8388105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3007916 
End bp3008455 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID644976812 
Producthypothetical protein 
Protein accessionYP_003134589 
Protein GI257056757 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0393178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATGC CCCCTGAGCC GACACGCGAG CTGCCGCCGG AGGAAGCGTG GCGTAAGGCC 
AAGGAGGTCT GTTTCGACCT CCTGGCCGCC CGTCCTCGGA CGAAGGAGGA GCTGCGCCAA
GCCTTACGAC GAAGAGGTTT CGCCGACGAC GTCAGTGAGC GACTGCTCGG CAAACTCGAT
GAGGCGGGGT TGGTGGACGA TGTCGCGTTC GCCGAGATGT GGGTGCGCTC GCGTCATACC
CACCGTGGGC TCGCGCGTCG TGCGCTGGTC ATGGAGCTGA AACGTAAGGG CGTCGATCCG
GAGATCGCGG TGGAAGCCGC TGATGCGATC GACCCGGAGG ACGAAGAGGA GCGCGCTCGG
CAACTGGTGC GCAAGAAACT GCGCACCATG GTCGACGTCG ACGAGCAGAA GGCCACGCGT
CGCCTGCTCG GATTGCTGGC CCGCAAAGGG TATCCGCAGG GACTGTCCTA TCAGGTCGTT
CGCGAGGAAC TCCGGGCAGC GGGGGCCGAA TCGACCTTGC TTGACGAGCT CGAACCCTGA
 
Protein sequence
MPMPPEPTRE LPPEEAWRKA KEVCFDLLAA RPRTKEELRQ ALRRRGFADD VSERLLGKLD 
EAGLVDDVAF AEMWVRSRHT HRGLARRALV MELKRKGVDP EIAVEAADAI DPEDEEERAR
QLVRKKLRTM VDVDEQKATR RLLGLLARKG YPQGLSYQVV REELRAAGAE STLLDELEP