Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26890 |
Symbol | |
ID | 8388013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2895094 |
End bp | 2896023 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976723 |
Product | hypothetical protein |
Protein accession | YP_003134500 |
Protein GI | 257056668 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.66835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGC AAACGACGAC ACGCCCCGAG GTCACCGAGT TGCCCGACTA CCGCGCCCTG TTCGTCGCGG ACATGCGTGG GTTCGGCAGT GTCCCCGGAC GCGACCACGC ACAGGTGACC CAAGCGATCC CCGGACTGCT ACGGAACGCA TTCCAGCACT GCGGCCTCGG CTGGCTGTGG GAGAAGGCTC TTTTCCAAGA CACCACGGGA GACGGCTACT TCCTCTGCTT TGACAGCCGG TACGTCCCGT TCCTGTTGAA CCCGCTGCTT TCCGCGCTTC AGGACACACT CGAATTCCAG AATTCCCTGC TGCCCCATCC GATCCGGATG CGGGTGAGCG TCAACGTCGG TCCGTTGGCC GACACCGACG CCGAGTCGAT CAGTCGCGGC AGTGGTACCA CCCGCGTGGA GACACATCGC CTGCTGGACT CCTCCGCAGT GCGTTCGGTG CTGGACGACT CCGGTCCGGA GACCTGTGTG GCGGCGATCG TTCCGGAGCG GGTGGTCGAT GACGTCGTCG CCGCCGGGTA CAGCGCCGAA GGCACGAGCC TCTACCACCG CGTGGAGGCG CGGGAGAAGG AATACCACGG CGTGGCGTAC CTTCGGGTGC CCAAACCGTC CGGCGGCCTG CTCGCCCACG GGTTCACACC CCGCCACGAC ACCGAGCCGG ACACCGAAGC CGACCGAGCG ACACCGGAGG CAGGTCACAG CACCGGGGGA ACCACGGCCA CACACGTCGA CGGTCCGGTG GCCCAGCACG GGAGTCGGGT CACCACCGGC GTCGATGTCT CGGGCAGCGG CAACACCATC ACCACCGTGC ACGGTGATCA GCACCGGGGG CCGCGCTACG AAGGCGACGG ACAGATCCAC GTCGGCGGGA ACAACGCGGG CGTCATCAAG CAGACCATGA AGGGCAGGCG CGCCCGATGA
|
Protein sequence | MTEQTTTRPE VTELPDYRAL FVADMRGFGS VPGRDHAQVT QAIPGLLRNA FQHCGLGWLW EKALFQDTTG DGYFLCFDSR YVPFLLNPLL SALQDTLEFQ NSLLPHPIRM RVSVNVGPLA DTDAESISRG SGTTRVETHR LLDSSAVRSV LDDSGPETCV AAIVPERVVD DVVAAGYSAE GTSLYHRVEA REKEYHGVAY LRVPKPSGGL LAHGFTPRHD TEPDTEADRA TPEAGHSTGG TTATHVDGPV AQHGSRVTTG VDVSGSGNTI TTVHGDQHRG PRYEGDGQIH VGGNNAGVIK QTMKGRRAR
|
| |