Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_25140 |
Symbol | |
ID | 8387838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2708507 |
End bp | 2708983 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976554 |
Product | Helix-turn-helix protein |
Protein accession | YP_003134335 |
Protein GI | 257056503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGC TGTTGCGTGA GGCGATCGGT GATCGGCTCC GTCATGCCCG CACCACCAAG CGCCGGACGC TGCGCGATAT CTCCCGCGCC GCCAAGGTGA GTCTCGGGTA CTTGTCCGAG GTCGAGCGAG GCCAGAAGGA GGCGTCCAGC GAGTTGCTCG CCTCGATCTG CGAGGCGCTG GAGCTTCCTC TCGGCGAGTT GCTGCACAAT GTCGCGGCGG ATGTGTCGGC CCTCGATCGC GTCAACTCGG GTGTCGACCC CGCGGCTGAG CCGAGGCCGG ACCAGGCCCG TGCGAGCGAT ACCGGCGGCG CACGTGTCGC GGAAGGTAAG GAACCGGTCT CAGCTGGTTC CGGCGGGTTG GAGGAGGATC GTCTCGCCAG CGGAACGGCG GACAGCGACC TCTCCGATCT CTACCTCTCG CCTGCTTTGC GTACCACGAT TCGTGCTCCG AAGTCGAAGG CCGTCCTGGC GGCGTGA
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Protein sequence | MTVLLREAIG DRLRHARTTK RRTLRDISRA AKVSLGYLSE VERGQKEASS ELLASICEAL ELPLGELLHN VAADVSALDR VNSGVDPAAE PRPDQARASD TGGARVAEGK EPVSAGSGGL EEDRLASGTA DSDLSDLYLS PALRTTIRAP KSKAVLAA
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