| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23930 |
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| Symbol | |
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| ID | 8387717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2579537 |
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| End bp | 2581486 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976436 |
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| Product | aconitate hydratase |
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| Protein accession | YP_003134217 |
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| Protein GI | 257056385 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01342] aconitate hydratase, putative, Aquifex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.161871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0821905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAA CGGTGTCGCA CAAACTCATC GAGGACCATC TCGTCGACGG TCGTATGGAA
CCGGGGGCCG AGATAGCCCT GCGTGTCGAC CACACCCTCA CCCAGGACGC CACGGGCACG
CTCGTGATGC AGGAACTCGA AGCGCTCGGC CTCGACCGCG CGCAAACCGA GGTCAGCGTC
CAGTACGTCG ACCACAACCT GCTGCAGACC GATGAGAAGA ACGCCGAGGA CCACGCCTAC
CTGCGGTCGG CCTGTCGTCG ATACGGCATC TGGTACTCCA AGGCCGGTAA CGGGGTGTCA
CATCCGACGC ACATGCAGCG ATTCGGTGTC CCGGGCAAGA GCATGGTGGG CTCCGATTCG
CACACGCCCG CGTCCGGGGC GATGGGCATG CTGGCCATCG GCGTGGGCGG TTTGGAGGCG
GCGACGGCGA TCGCGGGCGA ACCGGTGTAC TTGCGGATGC CGGAGATCTG GGGTGTGCGG
CTGACCGGGG AACTGCCCCC GTGGACATCG GCGAAGGACA TCATCCTGGA GATGCTGCGC
AGACACAGTG TCAAGGCCGG GCTGAACCGC ATCATCGAGT ACTACGGTCC GGGCTTGTCG
ACACTGTCGG CGATGGACCG CCACGTGATC GCCAACATGG GCACGGAGTT GGGTGCCACC
ACGACCGTGT TCCCGTCCGA TGCCGCGGTG TACGAATTCA TGCGCTCCGA GGGCAGGGAG
GACGATTACC AGGAGATCCT GGCGGACCCG GACGCCACCT ACGACATCGA AGAAGAGATA
GATCTGTCCA CAATAGAGCC TCTGATCGCG AAACCGTCCT CGCCGGACAA CGTGGTGCCT
GTCCAAGAGG TGGCGGGGAC GGACGTCGGC CAGGTGGTCA TCGGGTCGTC GGCCAACCCC
GGGTTACGGG ATTTCGCCAT CGCCGCCGCC ATGATGCGGG GACGGCAGGC CCACGATTCC
GTGAGCTTCG ACGTCAACCC CACGTCCCGG GAGATCCTGG CCGACCTCAC GAGGATGGGC
GGCACGTTCG ATCTGATCTC GGCGGGAGCG CGGATCCACC AGGCGGGGTG TATGGGCTGC
ATCGGGATGG GGCAGGCCCC CGCCGTGGGG CACAACTCCC TGCGCACGTT CCCCCGGAAC
TTCCCGGGAC GGAGCGGTAC CCGCGAGGAC GCGGTGTGGC TGTGCTCACC CGAGACGGCC
GCGGCCTCCG CGCTCACCGG TGTGATCACC GACCCGCGGG AACTGATGGA CGAACTGGGC
CAGGAGTACC CGGATCTGCC GCTGCCCGAG CGGGCGACGG TGAACACGGA CATGCTGGTA
CCGCCGCTGC CTCCTGAGGA GGCCCGTGGG GAACGACTGG TCAAGGGGCC CAACATCTCG
ACGCTGCCGG ATTTCCCGCC GCTGCCGTCG AACGTCGAGG CTCCCGTGTT GCTCAAGGTG
GGCGACAACC TCTCCACCGA CGAGATCTCC CCCGCGGGGG CGAGGGCGCT GCCGTACCGG
TCGAACGTGC CGCAGCTGGC TGAGTTCACG TTCGACCAGG TGGACCCGAC GTATCCGGCG
AGGGCGAAGG AGTGCGCCGA CACCGGGCAC CTCGTGGTGG GCGGTGACAA CTACGGCCAG
GGCTCGTCAC GCGAACACGC CGCGATCACC CCTCGTTACC TCGGGTTGAA GGCCGTCATC
GCCAAGTCGT TCGCACGTAT CCACTGGCAG AACCTCGCGA ACTTCGGCAT CCTCGCGCTG
GAGTTCACCG ACCCCGCCGA CTACGACCGC ATCGACCAGG GTGACGTGCT GGTGTTGGAG
AACCTGCGCG ACGAGTTCGC GAGGAGCCCC GAGCTGACCG TGCACAACCG GACGAAGGGC
GAGGACTACC GCGTGCACCA CCGGTTGTCG CGGCGCCAGA TGGACGCCGT GCTCGCCGGC
GGGCGAATTC CGCTGCTAGC GCGCTCGTGA
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| Protein sequence | MGKTVSHKLI EDHLVDGRME PGAEIALRVD HTLTQDATGT LVMQELEALG LDRAQTEVSV
QYVDHNLLQT DEKNAEDHAY LRSACRRYGI WYSKAGNGVS HPTHMQRFGV PGKSMVGSDS
HTPASGAMGM LAIGVGGLEA ATAIAGEPVY LRMPEIWGVR LTGELPPWTS AKDIILEMLR
RHSVKAGLNR IIEYYGPGLS TLSAMDRHVI ANMGTELGAT TTVFPSDAAV YEFMRSEGRE
DDYQEILADP DATYDIEEEI DLSTIEPLIA KPSSPDNVVP VQEVAGTDVG QVVIGSSANP
GLRDFAIAAA MMRGRQAHDS VSFDVNPTSR EILADLTRMG GTFDLISAGA RIHQAGCMGC
IGMGQAPAVG HNSLRTFPRN FPGRSGTRED AVWLCSPETA AASALTGVIT DPRELMDELG
QEYPDLPLPE RATVNTDMLV PPLPPEEARG ERLVKGPNIS TLPDFPPLPS NVEAPVLLKV
GDNLSTDEIS PAGARALPYR SNVPQLAEFT FDQVDPTYPA RAKECADTGH LVVGGDNYGQ
GSSREHAAIT PRYLGLKAVI AKSFARIHWQ NLANFGILAL EFTDPADYDR IDQGDVLVLE
NLRDEFARSP ELTVHNRTKG EDYRVHHRLS RRQMDAVLAG GRIPLLARS
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