Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23010 |
Symbol | |
ID | 8387625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2475778 |
End bp | 2476545 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644976354 |
Product | ABC-type branched-chain amino acid transport systems, ATPase component |
Protein accession | YP_003134136 |
Protein GI | 257056304 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.409418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0665453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG TGTTGGACCA GCGGCACACC CGGGGGGACG GCGTGGTGCG CGACGGGCTG TGGGTGCAGG GGCTGACCAC CCGTTACGGC CCGGTCACCG CGCTCGACGA CGTGGACCTC ACCGCGCCCG GAGGGCGGAT CACCGCCGTG TTGGGAGCAA ACGGTGCGGG CAAGACCACG TTGCTCCGCA CGGTGTCGGG ACTGCTGCGA CCACAGGCGG GGCGGATCGG ACTCGGCGGG ACGGACCTCA CCGGAGTGAA CGCCGAGGAC GTCGCCCGGG CCGGTGTCGC CCACGTCCCC GAAGGCCGAG GGGTGATCAC GGAACTGACG GTGGAGGAGA ACCTGCGCCT GGGGGCGTTG CTCGGCTCCG TCCGCTCGTC GGTACGGACC CCGCCCACGA TCGCCGACGT GTACACCCTG TTCCCGTCAC TGCGACGGCG CAAAAGCCAG GCCGCGCATT CGCTGTCCGG CGGTGAGCGA CAGATGCTCG TGATCGGTCG GGCGCTGTTG TCGGCGCCCG AGGTGCTGCT GTTGGACGAG CCGTCGCTCG GATTGGCCCC CCAGATCGTC TCCCGCATCT TCGCGGTACT GCGGGAACTC GTCGACACCG AGGGGCTCGC AGTGTTGCTC GTCGAACAGA ACGCACGCAG CGCACTGTCC ATCGCGGACA CCGGAGTGGT GCTGAACCTC GGCAGGGTGG TGGCGTGCTC GGACGCCGCG GAGCTCGCCG CGGACGACGA GCTCCGCCAC GCCTACCTCG GCTTCTGA
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Protein sequence | MNSVLDQRHT RGDGVVRDGL WVQGLTTRYG PVTALDDVDL TAPGGRITAV LGANGAGKTT LLRTVSGLLR PQAGRIGLGG TDLTGVNAED VARAGVAHVP EGRGVITELT VEENLRLGAL LGSVRSSVRT PPTIADVYTL FPSLRRRKSQ AAHSLSGGER QMLVIGRALL SAPEVLLLDE PSLGLAPQIV SRIFAVLREL VDTEGLAVLL VEQNARSALS IADTGVVLNL GRVVACSDAA ELAADDELRH AYLGF
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