Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22880 |
Symbol | |
ID | 8387612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2460478 |
End bp | 2461389 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644976341 |
Product | universal stress protein UspA-like protein |
Protein accession | YP_003134123 |
Protein GI | 257056291 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.538505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.514457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACGA TCGTTGTGGG GGTGGACGGC TCCCCCTCCG CCGTCAACGC GGTCCGCTGG GCCGCCGCGG AGGCCGCGAG CCGGGACGAG ACGGTGCGGC TCGTCCACGC CTACGAGGTC CCACGTCACG GCTATCCGGA TTTCGTGACG ACGTTCGCGC GTCTGCGGGA AGGCATGCGG CATCAGGGGG AGCAGTGGCT GAAGGAGGCG CGGGCGGCGG CGGAGGAGAC GGCTCCGGGG GTCGCCGTGG AGACCGAGCT CGTCGAGAAC GAGCCGGTGA CCGTGCTGAT CGACCGGTCG CGCCGATGTC GTTTGGTGGT GCTGGGTTCC CGGGGGCTGG GCGGCTTCAC CGGAATGCTC GTGGGATCGG TGGCCTTGGC GTTGGCCGCC CACGGACGCT CCCCCGTCGT CGTGGTGCGG GGTCCTCGCC CGAACGAGCC ACCGCCGGCC GAAGGGCGGA TCGTCGTCGG CGTGGACGGT TCGGCACCGA GCACGGCCGC CCTGGAGTTC GCCTTCGACA CGGCCCACAC GCGGCGGGGG GAGTTGGTCG TGGTGCGCGT GTGGGGCGGT GTCTCCTTCG ATGACCTGGT GTCCCACCAT CCGTTGAGAG TGGACCTCGG TGAGATCGAG ACGCAAGAGC GGACCGCGTT GGACGAGCAG GTACGGCCGT GGCGGGACAG GTATCCGGAG GTCCCCGTCG AGACCGTCGT GGTCAAGGGA CGGCCCGCCC GCATGCTGCT GGACCACGCC GAGCGTGCGT GGCTGGTGGT CGTGGGCAGT CGGGGGCGCG AGGGTATCCA GGGCATGCTG CTGGGGTCCA CGAGCCGGAC CCTCCTCACC CATGCCCCGT GCCCGGTGGC CGTGGTCCGG CGTTCCCCAC AAGGGGAAGA GTCGGCGGAC GCGACCCCGT GA
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Protein sequence | MGTIVVGVDG SPSAVNAVRW AAAEAASRDE TVRLVHAYEV PRHGYPDFVT TFARLREGMR HQGEQWLKEA RAAAEETAPG VAVETELVEN EPVTVLIDRS RRCRLVVLGS RGLGGFTGML VGSVALALAA HGRSPVVVVR GPRPNEPPPA EGRIVVGVDG SAPSTAALEF AFDTAHTRRG ELVVVRVWGG VSFDDLVSHH PLRVDLGEIE TQERTALDEQ VRPWRDRYPE VPVETVVVKG RPARMLLDHA ERAWLVVVGS RGREGIQGML LGSTSRTLLT HAPCPVAVVR RSPQGEESAD ATP
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