Gene Svir_21100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21100 
Symbol 
ID8387434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2263061 
End bp2263447 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID644976168 
Productankyrin repeat-containing protein 
Protein accessionYP_003133950 
Protein GI257056118 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.697064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.168349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG GTGGGTTGAC GCCGGAGCAG GTGGGGCGCG TCGTGGCGTT GGCCATGGAT 
CTGGCGCGTG AAGGTGACAC GAAACAACTC GGGGAGTTCA TCGACCACGG ACTACCGGTG
AACGTGACCG ATCCGGCCGG GAACACGCTG CTCATGCTCG CCGCCTATCA CGGACACGCC
GAGACGGTGC GTGACCTGCT CGCCCGTGGC GCGGACCCGA ACCTCCGCAA CGCACGTGAT
CAGGCTCCGA TAGCCGGAGC GCTGTTCAAG GGGGAGGACG AGGTCGTGAC CGTACTGCGA
CAAGCGGGGG CGGACCTCGA CGCGGGAACG CCGTCGGCGC GCGTCGCCGC CGTGATGTTC
GGCCGGGAGT ACCTGCTTGG CGAATGA
 
Protein sequence
MNAGGLTPEQ VGRVVALAMD LAREGDTKQL GEFIDHGLPV NVTDPAGNTL LMLAAYHGHA 
ETVRDLLARG ADPNLRNARD QAPIAGALFK GEDEVVTVLR QAGADLDAGT PSARVAAVMF
GREYLLGE