| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20770 |
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| Symbol | |
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| ID | 8387401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2210477 |
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| End bp | 2211898 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976135 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003133917 |
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| Protein GI | 257056085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00107879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0501756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG GTGTGCGGGG TGGCGGCACC CTGGAGCGGA CCGGCGCACC GTTGCTGGGA
GTGGCGTTCA TCCTGGTGCT CGGCACCTTC ATGGCGTCGT TGGACGCCAC GATCGTCGCT
GTCGGTATCG ACACCCTCGT CGAGGAGTTC GATGCCTCGG TCGCCGACAT CCAGTGGGTG
ACGACGGCGT ATCTGCTGGC GATCGTCACC GTGATGCCGA TGTCGGGGTG GTTGGCGGAT
CGGTTCGGCG GCCGTCGCAC CTGGCTGACG GCCGTGGCGG TGTTCCTGCT GGGGTCCGTG
GCCTGCGCTG TGGCGTGGTC GGTCCCCAGC CTGGTGGTGT TCCGCGTGCT GCAGGGCCTG
GGTGGGGGGC TGTTGCCCCC GACGGGGCAG GCGCTGCTCG CACGCGTGGC CGGACCGGAA
CGGATCGGTC GGATCATCAG CGTGGTGTCG GTGGTTCCCC TGTTGTCCCC GGTGCTGGGG
CCGCTGATCG GCGGGTCGAT CCTGTCGGTG GCCGAGTGGC CGTGGTTGTT CCTCGTGAAC
ATCCCGATCG GTCTGGTCGC GATGGTGCTC GCGTGGCGTT ACGTGCCCGT CGTCGCCCCC
ACCGACCGGA GCGCACCGTT CGACGTCCGG GGGGCGATGC TGCTGCCACC CGGGTTGGCC
GTGCTGGTGT TCGGCCTGAC GGAACTCGCG GACACCGGCC AAGGCGGCAC ATTCGACGTC
GCGATCGTCG CCTTAGCCGT GGGGGTGGGC ATGCTGGTGG CCTTCGGGGT GCACGGCATG
CGGTCCCGAC GTCCGGCGTT GCTCGACGTC CGGTTGTTCA CGCGGCCTCC GTTCGGCGCG
GCGGCCACCG CGTTGTTGGC GGTCGCCGCG TCGGTGTTCG GCACCATGTT CCTGTTGCCG
TTGTTCCTGC AGGCCGGGCG CGGACTGTCG GCATGGGAGG CCGGGCTGCT GCTGGCCCCC
CAGGGGGTGG GGGCAGCCGT GGGGGCCTTG GTGGTGAGTC GCATCATCGG CCAGTTCGCC
CCTCGGACGC TGGTGCTCAC CGGTATGGCG TTGATCGCGA TCGGCACCGT GCCGTTCACC
CAACTGCCCG ACCTCGGCGA CGGGGTCATC GCCGTCGCAC TGCTGGTGCG GGGGATGGGC
TCGGCGTTGA TCGGGGCGCC GACGATGAAC ATCGTGTACA GCCGGATCGA GGCCACACAG
ACCGCTCGTG CCTCCAGCGC GCTCAACCTC ATGCACTACG TCGGTGGTTC GCTGGGCACC
GCCGTGCTCG CGGTGGTGTT GCAGACCCGG TTGTCGGCCG AGGGGGTCGA CGTGACCTCC
GCGTTCGCCG GGTGTTTCTG GTGGGTGCTC GGACTGTGCG TGGTCGCGGC GCTGTGGGCG
GTGAGACTGC CGAGGCGGGT CGAACGGGCG AGGTCCTCGT GA
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| Protein sequence | MSSGVRGGGT LERTGAPLLG VAFILVLGTF MASLDATIVA VGIDTLVEEF DASVADIQWV
TTAYLLAIVT VMPMSGWLAD RFGGRRTWLT AVAVFLLGSV ACAVAWSVPS LVVFRVLQGL
GGGLLPPTGQ ALLARVAGPE RIGRIISVVS VVPLLSPVLG PLIGGSILSV AEWPWLFLVN
IPIGLVAMVL AWRYVPVVAP TDRSAPFDVR GAMLLPPGLA VLVFGLTELA DTGQGGTFDV
AIVALAVGVG MLVAFGVHGM RSRRPALLDV RLFTRPPFGA AATALLAVAA SVFGTMFLLP
LFLQAGRGLS AWEAGLLLAP QGVGAAVGAL VVSRIIGQFA PRTLVLTGMA LIAIGTVPFT
QLPDLGDGVI AVALLVRGMG SALIGAPTMN IVYSRIEATQ TARASSALNL MHYVGGSLGT
AVLAVVLQTR LSAEGVDVTS AFAGCFWWVL GLCVVAALWA VRLPRRVERA RSS
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