Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18340 |
Symbol | |
ID | 8387161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1904534 |
End bp | 1905382 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975902 |
Product | ABC-type multidrug transport system, permease component |
Protein accession | YP_003133684 |
Protein GI | 257055852 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.823039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCCA GCCCTGCACC GAACCGGACG TCACAAGCCG ACACGGACCC GGGATCGTGG CCGCGCCCCA CGGCCTCATC ACAGCTGTGG GTGCTGTTCC TCCGGCAGCT CCGGGTGATC TACGCCGACC GTCGGGTCGC CCTTTTCACC CTGCTCCAGC CGCTGATCAT GCTGATGCTG TTCAGCCAGG TGTTCGGCCG GATGGTCGAT ACCGCCGTGC TTCCCGAGGG GGTCCGCTAC ATCGACTACC TGGTGCCGGC GCTGCTGGTC ACGACCGGCA TCGGGTCATC GCAAGGGGCC GGACTCGGCC TGGTCCGCGA CATGGAATCG GGCATGGTGG CCAGATTCCG CACCCTGCCG GTCAACCGGG TCATGGTCCT GCTCGCCCGG TCGTTGGCGG ACTTGACCAA GGTGCTCATG CAATTGGTCG TGTTGACGGC TTGTTGTGTG CTGGCCATGG GTTTCGCCCC CGCGGGCGGA TTCGTCAACC TCGGCTTGTC GGTGCTGCTG ACGTTGCTGA TCGTGTGGGC CCTCATCTGG ATCTTCATCG CGCTCGCCAC CTGGCTGCGG AACATCGAGA TGCTGTCCAG CATCGGGTTC CTCGTGACGT TCCCCCTGAT GTTCGCCTCG AGCGCCTTCG TACCGATCGA CGTACTGCCG AGGTGGCTGC AGGTCGTCGC CATCGTGAAC CCGGTGACCT ACGCGGTCAA CGCCTCGCGC GCGCTCTCGC TGGATTGGCC GGATGCCGGA TTGTTGTCGC TGGCCGCGTT ACTCACCGGC GGCGTGCTCA TCGCACTGGC CATGACGGTC GCCGTGCGCA AGTTCGCCAC GCCCTGGGGC GAGGGCTGA
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Protein sequence | MRASPAPNRT SQADTDPGSW PRPTASSQLW VLFLRQLRVI YADRRVALFT LLQPLIMLML FSQVFGRMVD TAVLPEGVRY IDYLVPALLV TTGIGSSQGA GLGLVRDMES GMVARFRTLP VNRVMVLLAR SLADLTKVLM QLVVLTACCV LAMGFAPAGG FVNLGLSVLL TLLIVWALIW IFIALATWLR NIEMLSSIGF LVTFPLMFAS SAFVPIDVLP RWLQVVAIVN PVTYAVNASR ALSLDWPDAG LLSLAALLTG GVLIALAMTV AVRKFATPWG EG
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