Gene Svir_18010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18010 
Symbol 
ID8387128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1869315 
End bp1870070 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID644975869 
ProductEnoyl-CoA hydratase 
Protein accessionYP_003133651 
Protein GI257055819 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.671643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CGGTGAACTA CGCCGTCACC GACGGCGTCG CGCACATCCG ACTGAACCGT 
CCCGACGCGG CCAACGCCCT GAACCTGCCC GCGGCACAGC AGTTGCGCGC TGCGGCTGTG
CGGGCGGGTG AGGACGACGA CGTCCGGGCC GTGTTGGTCA CGGGGGCGGG TTCCCGGTTC
TGTGCGGGTG GGGACGTGGG GTCGTTCGTG GAGGCGGACG ACCAGGCGGC GTATCTGCAC
GAGCTGGCGA CCGACGCCGC GACGACAGCG ATCGCCGCGC TGGAGAAACC CGTCGTCGCG
GCCGTGCACG GCGCGGTGGC GGGAGCCGGT CTGGCCCTGA TGCTCAGCTG TGACGTGGTG
GTCGCGGCGT CCGGGACCAA GTTCGTGTTC GCCTACCCTT CCATCGGCCT CACGCCCGAT
TGCGGACTGT CCTATCTGCT GCCGCGCGCG ATCGGGCAGC AGCGGGCGCT GACGTTCGCG
TTGTCGGGCA AGCCCGTCGA CGCGGCACGG GCACTGGAGT GGGGCTTGGT GTCGGAGGTG
GCCGAGAACG CCGAGGCGGC CATCACCCGG GGCCGTGAAG TGGTCGCGGG GTTCGCGACC
GGTCCGCATC GGGCGCTTGG TCAGGTCCGT CGGCTGCTGC GCGCGGGGTG GGAGATGGAC
CGCGCCGCCA CCGGTGCCGA GGAGGCTCGC ACCATCAGCG ACATGGTGAC CGGTGCCGAG
GCACAGGTGC TGATCAGCGA GTTCATCAAC CGCTGA
 
Protein sequence
MSESVNYAVT DGVAHIRLNR PDAANALNLP AAQQLRAAAV RAGEDDDVRA VLVTGAGSRF 
CAGGDVGSFV EADDQAAYLH ELATDAATTA IAALEKPVVA AVHGAVAGAG LALMLSCDVV
VAASGTKFVF AYPSIGLTPD CGLSYLLPRA IGQQRALTFA LSGKPVDAAR ALEWGLVSEV
AENAEAAITR GREVVAGFAT GPHRALGQVR RLLRAGWEMD RAATGAEEAR TISDMVTGAE
AQVLISEFIN R