| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17870 |
|---|
| Symbol | |
|---|
| ID | 8387114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1854867 |
|---|
| End bp | 1855292 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975857 |
|---|
| Product | predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| Protein accession | YP_003133639 |
|---|
| Protein GI | 257055807 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.736361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.638502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCGGC CGCTGAGGCG ATCCCACGGA AGCGGTGACG AGGAGGATCA GGTGACGGGT
GGGCGAGGAC GAACGCGGTT GGAGGGGAGT GTCTGCCGTG GCTGCGCGAC GGTGGCGTTC
CCCCCGGCAC AGACGTGCCG TCGCTGCGGC GGTCGGGAGA CGACGGTGAC CGAGCTCGGC
ACACAGGGCA CCCTCTGGGC GCACACGGTG CAGCGTTTCC CACCCAAGTC ACCCCCTTAC
GTCCCGCCTG CCGACGGTTT CCGGCCGTTC GCCGTCGGCT ACGTCGAACT CCCGGAAGGC
ATCAAGATCG AGGCGATCCT GGACTGCGAC GACGTCGACG AGCTCGTCGC CGGGGCACCG
ATGTCGTTGG TGGCGACGGA ACCGGTGCCC CGGTTCGCGC CGGTGCGGAC GGAGGAGGAG
CGCTGA
|
|---|
| Protein sequence | MGRPLRRSHG SGDEEDQVTG GRGRTRLEGS VCRGCATVAF PPAQTCRRCG GRETTVTELG
TQGTLWAHTV QRFPPKSPPY VPPADGFRPF AVGYVELPEG IKIEAILDCD DVDELVAGAP
MSLVATEPVP RFAPVRTEEE R
|
|---|
| |