| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17620 |
|---|
| Symbol | |
|---|
| ID | 8387090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1827355 |
|---|
| End bp | 1828419 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975834 |
|---|
| Product | ABC-type Fe3+-siderophore transport system, permease component |
|---|
| Protein accession | YP_003133616 |
|---|
| Protein GI | 257055784 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CGCTCGACGA TGGGCCCACC CCCTCGTGGT TGCGTTCGGG CTGGGTGCCG
CACCTGGTAC TCGGTCTCGC ACTCGCCGTG GCGATGGTGC TCGCGCTCGG CGTGGGATCG
GTGCCGGTCG ATCCCGCCAC CGTCGTGGGG GTGATCGCAC GCCGCCTCGG CGCCGAACTG
GACGTGTCGG TGTTCGACGA CCGGATCGTG TGGCAGCTAC GCCTGCCGAG AGTGCTGGGC
GCGGCCGCGA CCGGGGCTGG GCTGGCACTC TGCGGCGCGG TGTTGCAGTC CCTGACCCGC
AACGACCTCG CCGAGCCGTA CTTGTTGGGT ATCTCCGGTG GCGCGGCGGT TGGCGCGGTG
AGTGTGCTCG TGCTGGGGAT CTCGGTCGGA AGTCTGGGTG GCGCGGCCCT CGTCGGGATC
GGCGCGTTCA CGGGCGCGTT GGGGGCACTG ATCCTGGTGT TGGGCCTCGC GGCCGGACGC
TCGGGCGCAC TACCGCCTAC GCGTGTCGTT CTGGCCGGAG TCGCGATCGG ACAGATCTGT
TCGGCGTACA CCTCGCTTCT GGTGGTCGTG GGTGGCGATC ACGACGCCGC GCGTCGCGTA
CTCAACTGGA CCCTCGGCTC CCTCGCCGGG GTGCGGTGGA CCGGTGCGCT CACCCTCGTG
GTGCTCATGG TCGCGGCTTT CGTACTCGTC GTGGCCTACG CCCCGGCCCT GGACGCGTTC
GCCTTCGGGG AGACCGCCGC AGGTTCCCTC GGTGTGCGCG TACAGGCGAC TCGGTGGACC
CTCATGACCG CCACGGCGTT GGTCACGGCC GGGCTAGTGT CGTTCACAGG CGCCATCGGG
TTCGTCGGTC TCGTCGTCCC ACACTTGGTG CGCCTGGTGT GCGGCCCGCT GCACGGTCGG
TTGCTTCCGC TCAGCGCACT GGCCGGAGCG GTGCTGCTCG TCCTCGCCGA TCTGCTCGCC
CGTTCCCTCG TCGAGGGTCA GGAGATCCCG ATCGGCGTCA TCACCGCGGT CGTCGGCGCC
CCGGTGTTCG CCTTCCTGCT GCGCCGTGAA GGGAGGTCGG CATGA
|
|---|
| Protein sequence | MTTTLDDGPT PSWLRSGWVP HLVLGLALAV AMVLALGVGS VPVDPATVVG VIARRLGAEL
DVSVFDDRIV WQLRLPRVLG AAATGAGLAL CGAVLQSLTR NDLAEPYLLG ISGGAAVGAV
SVLVLGISVG SLGGAALVGI GAFTGALGAL ILVLGLAAGR SGALPPTRVV LAGVAIGQIC
SAYTSLLVVV GGDHDAARRV LNWTLGSLAG VRWTGALTLV VLMVAAFVLV VAYAPALDAF
AFGETAAGSL GVRVQATRWT LMTATALVTA GLVSFTGAIG FVGLVVPHLV RLVCGPLHGR
LLPLSALAGA VLLVLADLLA RSLVEGQEIP IGVITAVVGA PVFAFLLRRE GRSA
|
|---|
| |