| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17330 |
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| Symbol | |
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| ID | 8387062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1789572 |
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| End bp | 1790717 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975806 |
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| Product | CRISPR-associated protein, Cse4 family |
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| Protein accession | YP_003133588 |
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| Protein GI | 257055756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCTC GGCTTTACGT CGACGTGCAC GTGTTGCAGA CCGTGCCGCC CGCCAACATC
AACCGCGACG ACAACGGTGA TCCCAAGGAA GCGTACTTCG GTGGCGTGCG CCGTTCCCGG
GTGTCCTCTC AGGCGTGGAA ACGCGCGACC CGGAAGTACT TCGCCGAGCA CAACCCCACC
GGATCGGGCG CGGTACGCAC CAAGCAAATC GCCTCTCAGC TCGCGAAGCG GCTGGACGAT
CGTCACAGGA TCGGCATGGA GCAGGCACAG CGGTTGGCGA ACGCGGTCCT GCAGCCGTTG
AAGATCAAGC CGGGACGCAA GGCGGGCGAA ACCGCTTACC TGCTGTTCTT CGGCTACGAG
CAGCTCGACG CCATCATCGA CCTCTTCGCC GAACAGATAC CCGAACTGGT GGAACTCGAC
GACGACACTC TCGCCGAGCG ACTCAAGGAC GTCGACGTCC AAGGCAGACT CAACCAGGGG
CACCCGCTTG ACGTCGCGCT GTTCGGCCGT ATGGTCGCCG ACATCCCCGC TCTCAACGTC
GACGCGGCCA CCCAAGTCGC CCACGCGTTG TCCACCCACT CCGTCGAGTT GGAAATGGAC
TACTACACCG CGGTCGATGA CGAGAACGAA CAGAACACCG GCGCGGGCAT GATCGGCACT
ATCGGGTTCA ACTCAGCCAC CCTCTACCGC TACGCCACGC TCGGGGTCCA CCAGCTTGAG
AAGAACCTCG GTGACGCCGA GGCCACTGAC GACGGTGCCC GGTTGTTCCT CGACGCCTTC
TCCCGTTCGA TGCCCACCGG CCACATCAAC TCCTACGCCC ACCGCACCCG CCCCAGCCTC
GTCGCGGTGA TCGTCCGGGC GGATCAGCCC GTCAACCTGG TGTCCGCGTT CGAAAAGCCG
GTCGCGTTGC GGGACGGTGA CACCGAGGGA ATCGCCGAGA AGTCCGCGTG CAGGCTTGCC
GCCGAGCACG AGCTCGCCGT GCGGCAGTGG GGTGATGGGC CCGTGTTCGC CGGTGCCTGC
CACACCTTCG CACCGGATTC CCGAGCAGCT CGCTCCGTGG AACAGGCGTT CGGCCCCAAC
CACACGTTCG GGGACCTGCT CGATCAACTC CACCGGGCGC TACGGGCTCA GCGGGAGAAC
GCATGA
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| Protein sequence | MTSRLYVDVH VLQTVPPANI NRDDNGDPKE AYFGGVRRSR VSSQAWKRAT RKYFAEHNPT
GSGAVRTKQI ASQLAKRLDD RHRIGMEQAQ RLANAVLQPL KIKPGRKAGE TAYLLFFGYE
QLDAIIDLFA EQIPELVELD DDTLAERLKD VDVQGRLNQG HPLDVALFGR MVADIPALNV
DAATQVAHAL STHSVELEMD YYTAVDDENE QNTGAGMIGT IGFNSATLYR YATLGVHQLE
KNLGDAEATD DGARLFLDAF SRSMPTGHIN SYAHRTRPSL VAVIVRADQP VNLVSAFEKP
VALRDGDTEG IAEKSACRLA AEHELAVRQW GDGPVFAGAC HTFAPDSRAA RSVEQAFGPN
HTFGDLLDQL HRALRAQREN A
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