| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17160 |
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| Symbol | |
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| ID | 8387047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1770074 |
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| End bp | 1771246 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644975791 |
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| Product | CRISPR-associated protein, Cse4 family |
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| Protein accession | YP_003133573 |
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| Protein GI | 257055741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CGAAGTACAT TGACATCCAC GTCATCCAGA CCCTCCCCTT TTCCAACGTG
AACCGCGACG ACACGGGCTC ACCCAAGACG GTGGAGTTCG GTGGCGTGGA ACGAACGAGG
GTGTCGAGCC AGAGCTGGAA GCGCGTCGTC CGCCAGCACG TGGAGGAGGC CGTGGGTGGC
GAGACCGTTC GCACTCGTCG CGTCGTGGTC GGTGTCGCGG AACGTCTGAT CAAGCAAGGC
TGGGAGAAGT CCGAGGCCGA AGCGGCCGGG GTTCAGATCG CTCTGTCCGC GGGGAAGAAG
ATCAGCCTGA AACAGGAGAA GGACGAAAGT GACGAGGTCG TCCTGACCAC CAACGTTCTG
CTGTTGTTGC CGGAAAGCGG AATCGATGAG CTGGCGGCCC TGGCCGACGA ACACCGTGAG
GTGATCCTCG CGGAAGCCAA GAAAGCGAAA AAGCTCACCG GCATGAAGCC GAAACTGCCG
TCGGAGAGGA TCAACGAGAT CCTCAGTCGC CGAAGTGCCA CCATCAACCT GTTCGGGCGG
ATGGTGGCCG AACTACCCGG CGCCAACGTC GACGGTGCGG TGCAGGTGGC GCATGCCTTC
ACCACCCACG GCACCGCGGT GGAGTACGAC TTCTTCACCG CCGTGGACGA CATCGAACAA
AAACTCGACC TCCCGGGAAG CGGTTATATG GACACCGCTT TGTTCAGCGC CGGAACCTTC
TACCGCTATG CCAACGTCAA TCTGACGGAC TTGCTCCGTA ACCTCGACCA GGACACGGAC
CTGGCTCGTG TGCTGGTGAA GACGTTCTTG GACGGTTTCA TCACCACGGT TCCCTCCGGC
AAGCAGAACG CGACGGCCGC TGTCACCCTG CCGGACCTCG TCCACGTCAC GGTACGTGAT
GATCGACCGG TGTCGCTGGC GAACGCGTTC GAAGCTCCCG TGGGCGGCGG TGACGGATTC
GTGAGGAAGT CAGCGCACCG ACTGGACTCC CATGCCGGGG CGATCGCTGA GTTGCTCGGC
GAGTCACACG TGCTGTTCTC CGCTCATACC ACCACACCGG GCGCGATGCC GAAGAACGCG
GAAGGGTGGG GCCATCTCGG CGTCAATGCG CGTTCGTTCG AGAAGTTGAT CGACGACGCG
GTGGGTGTGG CACTGCCCGG TGGGCGGTCA TGA
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| Protein sequence | MSTPKYIDIH VIQTLPFSNV NRDDTGSPKT VEFGGVERTR VSSQSWKRVV RQHVEEAVGG
ETVRTRRVVV GVAERLIKQG WEKSEAEAAG VQIALSAGKK ISLKQEKDES DEVVLTTNVL
LLLPESGIDE LAALADEHRE VILAEAKKAK KLTGMKPKLP SERINEILSR RSATINLFGR
MVAELPGANV DGAVQVAHAF TTHGTAVEYD FFTAVDDIEQ KLDLPGSGYM DTALFSAGTF
YRYANVNLTD LLRNLDQDTD LARVLVKTFL DGFITTVPSG KQNATAAVTL PDLVHVTVRD
DRPVSLANAF EAPVGGGDGF VRKSAHRLDS HAGAIAELLG ESHVLFSAHT TTPGAMPKNA
EGWGHLGVNA RSFEKLIDDA VGVALPGGRS
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