Gene Svir_16840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16840 
Symbol 
ID8387016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1738471 
End bp1738821 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content69% 
IMG OID644975760 
Producthypothetical protein 
Protein accessionYP_003133544 
Protein GI257055712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.505478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.321464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CACGTCGCGA CGAGCTGCCC CTGGCCGACT ACGACCACCT TCCCGTCCCC 
GCGCTACGCG ACCGCATCCG TTCACTGACG ACCGAAGAGC TCGAACAGCT CCTCGCCTAC
GAACAGGAAC ACGCCGACCG GTTACCGGTG GTGATGGCGA TGCACACCAG GTTGGAGGAG
CTGAAGCAGG GTGCCACCCC GACCTCGGGG CGACACGACA TCCGCCCGGA ACAGCCCGGG
GGCACCCGAC ACGGCTCCGC GATAAGCGGC GAGGAAACGA AGGGGGCGAG TCCCCCGCCA
CACGGTGTTC CGGCCCAGCC CGGCCGTCCC AAGGGCGACC GGTGGTCCTG A
 
Protein sequence
MSAPRRDELP LADYDHLPVP ALRDRIRSLT TEELEQLLAY EQEHADRLPV VMAMHTRLEE 
LKQGATPTSG RHDIRPEQPG GTRHGSAISG EETKGASPPP HGVPAQPGRP KGDRWS