Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14500 |
Symbol | |
ID | 8386783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1496990 |
End bp | 1498504 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644975529 |
Product | predicted membrane protein |
Protein accession | YP_003133317 |
Protein GI | 257055485 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCA CCGCACCGGA ATCGGAGTGG AAGCGGCTCG ACCGACGCAC GGTCACCGTC ACCGCGTTGC GGATGATGGG GGTCGCGGTC GTCGCCGGCG TCCCCATCGG AATCGGGGTC GGCCGTGCTC TCGCACCGGG GCCGGCCGTC GCGATCGTGG TGTCCGCCGG GGTCGTGCTC ACACTCGTGG CCGCCGGTGT GGACCACCTT CGGTGGCGCA GGACCCGCTA CCGGGTGTTG CCCGAACGCT TCGAACTCCG CCAAGGCATC GTCGTGCGCA AGCGCCGATC GCTCAACCGC GATCGCATCC GCACCGTGGA CATCACCGCG TCGGTGCTGC TGCGCCTGTT CGGACTCGCC CACGTGAAGA TCGGGACGGG CGAACAAGCG GAGGACAACG AGAGTTCGCT GTCGCTGAAC CCGATCAGCC GTGCCGACGC CGAGTGGCTG CGCCGGGAAC TGCTTGACCG GGCCGCTTTG CGGGAACCCG AGCCCGGTCA GGACGGGGTC CTGTCCACAC TGCACCTTCC CTGGGTGAGA TACGCGCCGG TGTCGTTCGT GACGCCCGCG CTCGGCGCGG CGGCGTTCGG TGTCGTGCTG CAGGTGGCGG AATGGTTCGG CCTGCAAAGC GACGTGGTCT CGTGGGTGCT CGATCTGCTG AGCGAGCTCT CCCTGATCGC GGTCGTCCTC GTGCTCGTGG CGATCGGGAT ACTCGTCGGC GCCATCGGCG CGGTGGCGTT GTTCGTGGAG ATGTGGTGGC AGTACCGGCT GGAACGCGAA CCCGGCGGCA CGTTGCGGGT GCGCCGGGGC CTGCTCACCA CCCGTTCGAT CTCCGTGGAG GAACGACGGC TGCGGGGCGT GGAACTGGTG GAGCCGCTCG GTAACCGACT GCTGGGGGCG GCCCGGCTCG ACGCGGTGGC CACCGGGCTG GCACAGCGGG AGCAGGACAA GAAGGCCGCC CATAACACCT TGCAGCCGGC CGCTCCCCGG GAGCACGCCG ATCGGGTCGC CGCCGCGGTG TTGCGCGAAC CCGTCTCACC CACCGCGGTG GCCCGACTGC GGCCGCATCC ACGGGCCGCG CGTGGTAGGC GGGTGCGGTG GGCGTTGGCC GCCGTCGCGG CCGTGCTGAC CCCCCTCGTG GTCGTGGGGC TGACGGTGAC GCCGGTGCTG CTGCACGTCG CGTGGGTGGG CGCGGTGGTG CTCGTGCCGG TCGCCGTGGC CCTGGCCCTC GATGCGTACC GGAACCTCGG CCACGGTCTC ACGGACGGCT ACCTGGTATT CCGGCACGGG ACCGTCCGCC GCGGCACCGT GGCGCTCCAA CGGTCCGGGG TCATCGGGTG GGCGGTGCGT CAGTCGTTCT TCCAACGTCG GCGGGGTCTG CTGACCCTCA CCGCCACCAC GGCGGCGGGG TCCCAGGCGT ACTCGGCCCA CGACGTGGAC GAGTCGGAAG GGTTGGCGTT CGCTGAGGAG GCCGTGCCCG GACTGCTGAC ACCGTTTTTG GAACGGGTTG ACTGA
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Protein sequence | MTSTAPESEW KRLDRRTVTV TALRMMGVAV VAGVPIGIGV GRALAPGPAV AIVVSAGVVL TLVAAGVDHL RWRRTRYRVL PERFELRQGI VVRKRRSLNR DRIRTVDITA SVLLRLFGLA HVKIGTGEQA EDNESSLSLN PISRADAEWL RRELLDRAAL REPEPGQDGV LSTLHLPWVR YAPVSFVTPA LGAAAFGVVL QVAEWFGLQS DVVSWVLDLL SELSLIAVVL VLVAIGILVG AIGAVALFVE MWWQYRLERE PGGTLRVRRG LLTTRSISVE ERRLRGVELV EPLGNRLLGA ARLDAVATGL AQREQDKKAA HNTLQPAAPR EHADRVAAAV LREPVSPTAV ARLRPHPRAA RGRRVRWALA AVAAVLTPLV VVGLTVTPVL LHVAWVGAVV LVPVAVALAL DAYRNLGHGL TDGYLVFRHG TVRRGTVALQ RSGVIGWAVR QSFFQRRRGL LTLTATTAAG SQAYSAHDVD ESEGLAFAEE AVPGLLTPFL ERVD
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