| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13560 |
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| Symbol | |
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| ID | 8386692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1399408 |
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| End bp | 1400139 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644975440 |
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| Product | conserved hypothetical protein TIGR00046 |
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| Protein accession | YP_003133230 |
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| Protein GI | 257055398 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.470335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCCTCG TGCCGTCGTT GCCCGACACC GGTTTCGCGG TGCTCGAGGG CGAGGAGGCA
CACCACGCCG TCACCGTGCG CAGGCTCCGG GAGGGTGAAC GGCTGGCGTT GTCCGACGGT
CGTGGCGGAC TGGCCGACTG CGTGGCCCAT GCCGTGCATC CGGGTCGGAA CCCCACCGTG
GAACTGCGGG TGGAGACGAC ACGTCACGTG TCCGCTCCGG CGCTTCGGGT CACGGTCGCG
CAGGCCTTGG CGAAAGGCGA CCGCGGGGAG CTGGCGGTGG AGACGGCCAC CGAGGCCGGA
GTCGATGCCG TCGTGCCGTG GCGGGCCGCT CGCAGCGTGG CGCGTTGGGA CGACGGCCCC
CGGGGTGCCA AGGCGTTGGC GAAATGGCGT GCCACCGCGC GTGCGGCGGC CAAACAGGCA
CGTCGGGCCT GGGTGCCCGA GGTGACCGAG CCGATGACCA CCCGACAGCT CGCGGCCAGG
ATCGCCGAGA CCGATCTCGC GCTGGTACTC GACGGGGACG CCTCCGAGTC CTTCGTCGAC
GTCGATTTCC CGGAGGAAGG GGAACTCCTG CTCGTCGTGG GTCCCGAAGG CGGTGTCGCG
CCCGAGGAGC GTGCCACGTT CGTGGAGGCG GGTGCGCGCT GTGTTCGGTT GGGACCGACG
GTGTTACGGA CTTCCACGGC GGCCACGGTG GCGCTCGGCG CGCTCGGTGC GCTGACTGCA
CGATGGGGGT AG
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| Protein sequence | MFLVPSLPDT GFAVLEGEEA HHAVTVRRLR EGERLALSDG RGGLADCVAH AVHPGRNPTV
ELRVETTRHV SAPALRVTVA QALAKGDRGE LAVETATEAG VDAVVPWRAA RSVARWDDGP
RGAKALAKWR ATARAAAKQA RRAWVPEVTE PMTTRQLAAR IAETDLALVL DGDASESFVD
VDFPEEGELL LVVGPEGGVA PEERATFVEA GARCVRLGPT VLRTSTAATV ALGALGALTA
RWG
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