| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13550 |
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| Symbol | |
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| ID | 8386691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1398205 |
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| End bp | 1399362 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975439 |
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| Product | DnaJ-class molecular chaperone with C-terminal Zn finger domain protein |
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| Protein accession | YP_003133229 |
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| Protein GI | 257055397 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.685498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGG ATTACTACGG CATCCTCGGC GTGTCGAAGA ATGCGACCGA CCAGGAGATC
AAACGCGCCT ACCGCAAGCT GGCGCGTGAG CTGCACCCCG ATGTCAACCC CTCCGAGGAC
GCACAGCACA AGTTCAGTGA GGTGACCACC GCCTACGAGG TACTGTCCGA CCCGCAGAAG
CGCAAGATCG TCGACCTCGG CGGTGACCCG ATGGACAACG GGGCCGGGGC GGGCGCCGCG
CGTGATCCGT TCGCCGGTTT CGGCGGGCTC GGCGACATCA TGGACGCCTT CTTCGGTGCC
GCCACCGGTG GTGCGCGGGG CCGGGGGCCG CGAAGCAGGG TGCAGCCCGG TTCCGACGCC
CTGATTCGAC TCCAGCTGAC GTTGGAGGAG TGCGCCACCG GCGTCAACAA GCAGATCACC
GTGGACACGG CCATCCTGTG CGACCGGTGT CGGGGCGCGG GTACCGCCGA AGGCGGCAGT
GTCGTCACGT GCGACACGTG CGGTGGCCAG GGCGAGGTGC AGTCCGTGCA GCGTTCGTTC
CTCGGTCAGG TCGTCACGGC TCGGCCGTGT CCGACCTGCC GTGGATACGG CGAGGTGATC
ACCGACCCGT GTCAGCAATG CGGTGGTGAC GGACGAGTAC GGGCCCGGAG GAACGTCACG
GCGAAGATCC CGCCCGGTGT CGGTGACGGC ATGCGCATCC GGCTGTCCGG ACAGGGCGAG
GTGGGCCCGG GCGGCGGCCC CGCGGGTGAC CTGTACGTCG AGGTCGAAGA ACTGCCGCAC
GAGGACTTCG AGCGACACGG CAACGACCTG CACTGCAAGC TGCGGGTACC GGTCACCACG
GCGGCGCTCG GGGCGGTGGT TCCGCTGGAA ACGCTCGTGG ACGGCGAGAC GGAAGTGGAG
ATCGAGCCCG GCACTCAGCC CGGTACCGAG CGGGTGCTGT CCGGGCTGGG GATGCCGCGG
TTGCGGTCGT CGGGTCGGGT GGACGGCCGC GGCGACCTGC ACGTGCACAT CGAGGTCGTG
GTGCCCACCA AGCTCGACGA GGAGCAGGCC GGGCTGCTGC GTGAGCTGGC GAGGCTACGG
GGTGAGGAGG CCCCGAGCTT GGCGGGCAAC GGTCACAAAC AGGGTGGTCT GTTCTCCAAG
CTGCGCTCGA AGCGCTGA
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| Protein sequence | MAKDYYGILG VSKNATDQEI KRAYRKLARE LHPDVNPSED AQHKFSEVTT AYEVLSDPQK
RKIVDLGGDP MDNGAGAGAA RDPFAGFGGL GDIMDAFFGA ATGGARGRGP RSRVQPGSDA
LIRLQLTLEE CATGVNKQIT VDTAILCDRC RGAGTAEGGS VVTCDTCGGQ GEVQSVQRSF
LGQVVTARPC PTCRGYGEVI TDPCQQCGGD GRVRARRNVT AKIPPGVGDG MRIRLSGQGE
VGPGGGPAGD LYVEVEELPH EDFERHGNDL HCKLRVPVTT AALGAVVPLE TLVDGETEVE
IEPGTQPGTE RVLSGLGMPR LRSSGRVDGR GDLHVHIEVV VPTKLDEEQA GLLRELARLR
GEEAPSLAGN GHKQGGLFSK LRSKR
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