Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12470 |
Symbol | |
ID | 8386584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1287856 |
End bp | 1288455 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975333 |
Product | ABC-2 type transporter |
Protein accession | YP_003133123 |
Protein GI | 257055291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.972225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTTGG TGCGCTGCGA CGGTTCGCCC GCGTTGTTGG TGGCCTCGGC CATGAACGGC GCGGTGTTCG ACGCGACGTT CAACGTGTTC TTCAAGTTCC GCTACGACAA GGTCTATGAG GGCGTGTTGA GCACGCCGCT GGGGCCGTTC GACATCGCCT TGGGCGAGAT CGGCTGGGCG GTGCTGCGCG GCAGCCTCTA CTCGGTGGGG TTCTTCGGGG TCATGGCGGT GATGGGCCTG GTCACCACGC CGTGGGCGGT GTTGGTGATC CCGGTGGCCG TCCTGGTGTC GTTCGCCTTC GCCGCGGTGG GCATGGTGTG TGCGACGCTG CTGCGCACCA CGTCGCAGTT CGACTACATC CAACTGGCCG TGATGCCGCT GTTCTTCTTC TCGACGACGT TCTACCCGTT GTCGGTCTAC CCCGAGCCGT TGCAAGTGAT CGTCCAATGT CTCCCGCTGT ATCATGGCGT CGAGTTGTCC CGCGGGTTCG CGGCCGGTGT CGTCGACGTG TCGATGTTCG GGCACGCCGC TTACCTGTTC GGGTTAGCCG TCCTCGGGGT CTATGGCGTC GCTCGTCGTA TCTCCACCCT GCGTCGTTGA
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Protein sequence | MRLVRCDGSP ALLVASAMNG AVFDATFNVF FKFRYDKVYE GVLSTPLGPF DIALGEIGWA VLRGSLYSVG FFGVMAVMGL VTTPWAVLVI PVAVLVSFAF AAVGMVCATL LRTTSQFDYI QLAVMPLFFF STTFYPLSVY PEPLQVIVQC LPLYHGVELS RGFAAGVVDV SMFGHAAYLF GLAVLGVYGV ARRISTLRR
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