Gene Svir_11510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11510 
Symbol 
ID8386488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1183993 
End bp1184604 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID644975241 
Productresponse regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein 
Protein accessionYP_003133034 
Protein GI257055202 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.575058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGC TGATCCGCAT CGTGCTGGCC GACGACGAGG ACCTGATCCG AGGTGCACTG 
GCGGCCCTGC TCGACCTGGA GGACGACATC GAGGTCGTCG GCCAGGCCGG GGACGGCGAC
GCCGCCGTGG AACTCGTGCG CCGCACCCGG CCCGACCTGG CCGTGTTCGA CCTGGAGATG
CCGAACTGCG ACGGCCTCGA CGCCACGAGC CGGGTCCGCG CCGAGCAGGA CATCCCCATC
GTGATCGTCA CCCGACACGC GCGGCCGGGC GTGTTGAAGC GAGCCCTGGC CGCCGGTGTC
CGCGGATTCG TGCCCAAGAC CACGGCCGCG AGCCGCCTGG CGGAGATCCT GCGGGACGTG
CATGCCGGCA AGCGTTACGT CGACCCGGAG ATCGCGGCCT CTGCGTTGAC GGCCACGAGC
TGCCCACTCA CCGAACGGGA ATTGGAGTTG CTGCGGTACG CCCACACGGG TAGCACCGTC
GGCGCGATCG CCGAGCGGGC ACGGCTCGCA CCGGGGACCG TGCGCAACTA TCTGTCATCG
GCGATGAGCA AACTCGGGGT GTCCACCCGT TACGAAGCCG CCCGTCGCGC ATGGGAGGAG
GGCTGGATCT GA
 
Protein sequence
MIELIRIVLA DDEDLIRGAL AALLDLEDDI EVVGQAGDGD AAVELVRRTR PDLAVFDLEM 
PNCDGLDATS RVRAEQDIPI VIVTRHARPG VLKRALAAGV RGFVPKTTAA SRLAEILRDV
HAGKRYVDPE IAASALTATS CPLTERELEL LRYAHTGSTV GAIAERARLA PGTVRNYLSS
AMSKLGVSTR YEAARRAWEE GWI