Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11400 |
Symbol | |
ID | 8386477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1175589 |
End bp | 1176245 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975230 |
Product | HemK-related putative methylase |
Protein accession | YP_003133023 |
Protein GI | 257055191 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00537] HemK-related putative methylase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTGC TGCGCCCGCC CGGTGTGTAC CGCCCACAGG ACGACACCGA CCTGTTGGTC GAGGCGCTGT CCGGGCTGAC GTTACGGTCG GGGGACAGGG TGTTGGACGT CGGAACGGGG ACGGGGGCGC TCGCCGTGGC CGCGGTGCGA TCCGGCGCGA CCGACGTCAC CGCCGTGGAC GTGTCCCTCC GCGCGCTCGC CGCGACGTGG CTCAACGCGC GGTTGCACAG GCTCCCCGTG CGGGTCCGCA GAGCCGACGT GACCGAAAGA CCTCCCCACG GGCGGTTCGA CCTCGTCCTC GCCAATCCGC CGTACGTGCC GTGTCCGGGC AAGGGGCGGG TATCCCGCCG TTGGGATGCG GGACCGGACG GCCGTGCGGT CATCGACCCG CTGTGTGTGG CCGTGCCACG GTTGCTGTCC GAACGGGGAA GCCTTCTACT CGTGCAGTCC TCGCTGTCGG ACGTGGATCG CACACTGGCC GCCCTGGCCG AGGCCGGGTT GGAGACGTCG ATCGTGCTAC GCAGGCCGGT GCCCTTCGGC CCGGTGCTGC GCAAACGTGC GCGTTACCTG GAACAGCGGG GACTGATCCC CGCAGGACAG CGCGAGGAAG AGTTGGTGGT CATCCGTGCC GACCGAACCG ACCGGACCGA CCCGTAG
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Protein sequence | MLLLRPPGVY RPQDDTDLLV EALSGLTLRS GDRVLDVGTG TGALAVAAVR SGATDVTAVD VSLRALAATW LNARLHRLPV RVRRADVTER PPHGRFDLVL ANPPYVPCPG KGRVSRRWDA GPDGRAVIDP LCVAVPRLLS ERGSLLLVQS SLSDVDRTLA ALAEAGLETS IVLRRPVPFG PVLRKRARYL EQRGLIPAGQ REEELVVIRA DRTDRTDP
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