| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10880 |
|---|
| Symbol | |
|---|
| ID | 8386425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1121310 |
|---|
| End bp | 1122434 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975178 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_003132971 |
|---|
| Protein GI | 257055139 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG ACGACAGCAA CGAGATCGAC GAGATCATGT CCGTGACCCT CGACCAGCTG
CCGCTGCGCG AGGACCTGCG GGGACGCAGC CCGTACGGTG CGCCGCAGCT GGACGTCCCG
GTGCGGCTCA ACACCAACGA GAACCCGTTC CCGCCGCCCG CCGAACTCGT GGACGACGTC
GCGAGCGCGG TGCGGGAGGT GGCGCGGAAC CTGAATCGCT ACCCGGACCG GGACGCGATC
GCGTTGCGGC GTGACCTCGC CGCCTATCTC ACCTCGGCGA CGGGGGTGCC GCTGACCGAA
CGGCACGTCT GGGCGGCCAA CGGCTCCAAC GAGATCCTGC AGCAACTGTT GCAGGCGTTC
GGCGGCCCAG GGCGGTCGGC GCTGGGGTTC GAGCCGTCGT ACTCGATGCA CCCGATCATC
TCGGCGGGGA CGCGTACCGA GTGGGTGCCC ACGCCGCGTC GGGACGATTT CACGCTCGAC
GCGGAGCGGG CCGCGGCGGT GGTGGCCGAC CGTGCGCCCG ACATCGTGTT CGTCACCAGC
CCGAACAACC CGACCGGAGG CTCGGTCCCG CTCGAGGACC TGGAGGCGAT CCTGCGGGCG
GCGCCGGGGC TGGTCGTGGT CGACGAGGCG TACGCGGAGT TCTCCTCGCG GCCGAGCGCC
GTGCATCTGC TGGCGAAGTT CCCGGCGAAG CTGGTGGTGT CGCGCACCAT GAGCAAGGCG
TTCGCGTTCG CGGGTGGGCG ACTCGGATAC CTGGCCGCGG CCCCGGCAGT GGTGGACGCA
CTGCAATTGG TGCGACTTCC CTATCACCTG TCTTCCCTGA CACAGGCGGC GGCGCGCGCC
GCTTTGCGGC ATGCCGATGC GACGCTGCGG TCGGTGGCGA CGTTGGCCGC CGAACGCGAC
CGTGTGGCGG AAGGGTTGCG TCAGCTCGGT TTCGAGCCGG TCCCCAGTGA CGCCAACTTC
ATCCTCTTCG GACGGTTCGC CGATCCCACC GCGGCATGGA AGTCCTATCT GGACTCCGGT
GTGTTGATCC GTGACATCGG TATCGCCGGA CATCTGCGCG TGTCCATCGG CACGCCCGAC
GAGAACGACG CCTTCCTACA GGCGAGCAAG GAGGTCCCGC GGTGA
|
|---|
| Protein sequence | MSADDSNEID EIMSVTLDQL PLREDLRGRS PYGAPQLDVP VRLNTNENPF PPPAELVDDV
ASAVREVARN LNRYPDRDAI ALRRDLAAYL TSATGVPLTE RHVWAANGSN EILQQLLQAF
GGPGRSALGF EPSYSMHPII SAGTRTEWVP TPRRDDFTLD AERAAAVVAD RAPDIVFVTS
PNNPTGGSVP LEDLEAILRA APGLVVVDEA YAEFSSRPSA VHLLAKFPAK LVVSRTMSKA
FAFAGGRLGY LAAAPAVVDA LQLVRLPYHL SSLTQAAARA ALRHADATLR SVATLAAERD
RVAEGLRQLG FEPVPSDANF ILFGRFADPT AAWKSYLDSG VLIRDIGIAG HLRVSIGTPD
ENDAFLQASK EVPR
|
|---|
| |