| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10840 |
|---|
| Symbol | |
|---|
| ID | 8386421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1116545 |
|---|
| End bp | 1118218 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644975174 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_003132967 |
|---|
| Protein GI | 257055135 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.24876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCT CGGTTTCCGA CTATAAGTCG AAAACTGAAT GGGAGGCCGA GGCCGATGTC
GTGGTGGTCG GCAGTGGTGT CGCCGGGCTG ACGGCCGCGC TCCGTGCCGC CGAATTGGGC
CTGCGGGTGC TGGTGGTCAC GAAGGGGCGG GTCACCGACG GCAACACCCG CTGGGCGCAG
GGCGGCGTGG CCGCGGTGCT CGACGACGGC CGCACCGACC ACGGTCGCAA CGACGTCGGG
TCCATCGACT CGATCGACGC CCACGTGGCG GACACCCTCC GCGCCGGGGC CGGATTGTGT
GACCCCGACG TGGTCCGCAC CGTCGTCGCG TCCGGCGCCG CCGCCGTGAA ACGGCTGCGC
AGCTGGGGAG CGCGATTCGA CATCGACGAC GAAGGCAGGC TGGCCCGCAC CCGTGAAGGC
GGACACAGCG CCTTCCGGGT GATCCACGCG GGTGGTGACG CCACGGGGGC GGAGGTGCAG
CGATGCCTCG TCGCCACGGC CCGACGCGAG GGATTGACGG TTCTGGAGCA GCACATCGCC
GTGGCCGCGC TGACCACGGA GACGGGCGCG GTGCGTGGAG TGCGGGTGCT GGCCACCGAC
GTCGAACCGG CCGCGTCGGG CATCGTGCGC GCCGGCGCGG TCGTGTTGGC CACCGGCGGC
CACGGACAGC TCTACCAGGC CACCTCCAAT CCCGAGCTCG CCACGGGTGA CGGGTTGGCG
CTGGCCCTGC GCGCGGGGGC CAGCGCGGCC GATCTGGAGT TCGTGCAGTT CCATCCCACG
GTGCTCTACA CCCCCGGGGC GCGGGGCCGC TGTCCGCTGA TCACGGAGGC GGTGCGAGGC
GAGGGCGCCG TGTTGGTGGA CGCGGCGGGC AAGCCCGTCA TGCGCGGGGT GCATCCCCTG
GAGGACCTCG CTCCCCGGGA CGTGGTGTCG GCCGCGATCG CGCGCAGGCT CGCCTCGGCC
CCCGGTGGCG TCGCCGATCA TGTGTTCCTC GACGCCACGG GGATACCGGA CTTCGCGCGC
CGATTCCCCA CGGTGCTGGC CACGTGCGTC GCCGCGGGGG TGGACCCGCG ACGGGAGCCG
ATCCCCGTCG CGCCCGCCGC GCATTTCGCG TGCGGTGGGG TGGTCACCGA CACGCACGGG
CGCACGGACG TGACCGGTCT CTACGCGGTC GGGGAGGTGG CGCGCACAGG ACTGCACGGT
GCCAACCGAC TGGCCTCGAA CAGCCTCCTC GAAGGGCTCG TACTCGGTCG ACGTGCGGCC
GAGGCCGTGG CGGCGGACCT GGCGAGCGGT GAGTCGGCCG CCGCCGTGGC CGAGTGCGAC
CCGTCTGTCC CGATCGCACC GGTGGCGGAG CGCTCGTCGT TGCAACGTCT GCTGAGCCGG
TACGCGGGGA TCGGTCGGGA CGCCGAGGGC TTGGCCGTGG CCGGCTCCGC GCTGGACGTC
TCCACGACCG ACGTTCCGTT GTGGACTTCG AGGGCGGTGG AGGACGCGGC GCTGACGCTC
GTGGCCCGTG CGTTGCTGGT GGCGGCGGCC GCGCGCACCG AGTCGCGGGG CTGTCACGTG
CGCACCGACC ATCCCGACCG TGACGACCGT GGCTGGCGGC GTAGCCAGAC CATCCGGCTG
AACCCGTCGG GACAACCTGT TTTGGCCGAT CCGATCCTGG AGGACGTGGC ATGA
|
|---|
| Protein sequence | MTPSVSDYKS KTEWEAEADV VVVGSGVAGL TAALRAAELG LRVLVVTKGR VTDGNTRWAQ
GGVAAVLDDG RTDHGRNDVG SIDSIDAHVA DTLRAGAGLC DPDVVRTVVA SGAAAVKRLR
SWGARFDIDD EGRLARTREG GHSAFRVIHA GGDATGAEVQ RCLVATARRE GLTVLEQHIA
VAALTTETGA VRGVRVLATD VEPAASGIVR AGAVVLATGG HGQLYQATSN PELATGDGLA
LALRAGASAA DLEFVQFHPT VLYTPGARGR CPLITEAVRG EGAVLVDAAG KPVMRGVHPL
EDLAPRDVVS AAIARRLASA PGGVADHVFL DATGIPDFAR RFPTVLATCV AAGVDPRREP
IPVAPAAHFA CGGVVTDTHG RTDVTGLYAV GEVARTGLHG ANRLASNSLL EGLVLGRRAA
EAVAADLASG ESAAAVAECD PSVPIAPVAE RSSLQRLLSR YAGIGRDAEG LAVAGSALDV
STTDVPLWTS RAVEDAALTL VARALLVAAA ARTESRGCHV RTDHPDRDDR GWRRSQTIRL
NPSGQPVLAD PILEDVA
|
|---|
| |