| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10460 |
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| Symbol | |
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| ID | 8386383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1076380 |
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| End bp | 1077120 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975136 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_003132929 |
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| Protein GI | 257055097 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00811076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.015008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGA AAGCCACTCG TTCCTGTCGC GCGTCCGGTG ACCCCGTGGA CGTCCGTGAG
GTCGGGGTCA TCGACTACCT CGAGGCTTGG GACCTCCAGC GCGAACTGGC CGTCGCCCGC
GCGAAGGGCG AAAGCCCCGA CACGATGCTG TTGCTGGAGC ACCCTTCGGT CTACACGGCG
GGTAAGCGCA CCCAACCGGA GGACCGACCG ACCGACGGAA CCCCTGTGAT CGACGTCGAC
CGAGGAGGCC GGATCACCTG GCACGGTCCC GGTCAGCTGG TCGGCTACCC GATCGTCAAG
CTCGCCGATC CCATCGATGT CGTGCACTAT GTGCGGCGTC TTGAAGAAGC GCTGATCTCG
GTGTGCGAGG AATTCGGCAT CCACACCGGC CGGGTCGAGG GCCGCAGCGG GGTCTGGGTA
CCCGCGGACG ACACCCGTCC CGAACGCAAG ATCGCGGCGA TCGGCATCCG GGTGCAACAA
GGCGTCACCA TGCACGGCTT CGAACTCAAC TGCAATCCCG ATCTGACGGC GTTCGATCGG
ATCGTGCCGT GCGGCATCCG GGACGCGGGG ACGACGTCGA TGTCGGCGGA GTTGGGCCGC
ACGGTGACCG TGGCGGAGGT CCTGCCCACG GTGCGGCAGG CGGTGCTCGC GGCGTTGGAC
GGCGAACTGC CGGTGAGTGA GGATCGTTGG TTGCCGCGGC AGCAGCCCGA GGCCCCCGGC
GTGACTTTCG CTCTCCAATA G
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| Protein sequence | MSQKATRSCR ASGDPVDVRE VGVIDYLEAW DLQRELAVAR AKGESPDTML LLEHPSVYTA
GKRTQPEDRP TDGTPVIDVD RGGRITWHGP GQLVGYPIVK LADPIDVVHY VRRLEEALIS
VCEEFGIHTG RVEGRSGVWV PADDTRPERK IAAIGIRVQQ GVTMHGFELN CNPDLTAFDR
IVPCGIRDAG TTSMSAELGR TVTVAEVLPT VRQAVLAALD GELPVSEDRW LPRQQPEAPG
VTFALQ
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