Gene Svir_09640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09640 
Symbol 
ID8386301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp992942 
End bp993715 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID644975054 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003132848 
Protein GI257055016 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.936146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.241147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCTG CCAGATCGGG CAACAGCGGC GTCCAATCGC TTCAGCGCGC ATTCGAACTG 
CTGGAGCGAC TCGCCGACGC GGGAGGTGAG GCGAGCCTGT CGGAACTGGC CGCCTCGTCC
GGGCTGCCCA TGCCCACGAT CCACCGGCTC ATCCGCACTC TCGTCACCCT CGGCTACGTC
CGGCAGAACA CCAATCGCCG CTACGCGCTG GGGGCACGGC TGATCCGACT CGGGGAGAAC
GCCAGTCTCC AGTTCGGCAC CTGGGCCCGA CCGCTGCTGG CCGAACTGGT GGACGAGGTC
GGTGAGACCG CGAACCTGGC CGTACTGGAA CGCGACGAGG TCGTGTACGT GGCGCAAGTG
GCGTCGAACC GGCACTCGAT GCGCATGTTC ACCGAGGTGG GTCGCAGACT GCTCCCCCAC
GGTACGGGAG TCGGCAAGGC CATGCTGGCC ACACTGGCCC CGGACGACGC GCGGGCCCTG
TTACAGCGCA CCGGCATGCC CGCCTACACC GAGCACACCC ACACCGACAT CGACTCCCTG
CTCGACCACC TCGCCGAGAT CTCCGAACAG GGTTACGCCC TCGACTCCAG CGAACAAGAA
CTCGGCGTGC GGTGTATCGC GGCGGCCGTT CCCGGCGCTC CGGCACCCAC GGCGGTGTCC
GTCTCAGGCC CGGAGGGACG CTTGACCGAC GAAGCCGTAC GCGACATCGC ACCCGCTGTG
CGGCGAACGG CGGCGCGACT GGCGGAACAC CTCGTCCAAC GCAACGACGA GTGA
 
Protein sequence
MASARSGNSG VQSLQRAFEL LERLADAGGE ASLSELAASS GLPMPTIHRL IRTLVTLGYV 
RQNTNRRYAL GARLIRLGEN ASLQFGTWAR PLLAELVDEV GETANLAVLE RDEVVYVAQV
ASNRHSMRMF TEVGRRLLPH GTGVGKAMLA TLAPDDARAL LQRTGMPAYT EHTHTDIDSL
LDHLAEISEQ GYALDSSEQE LGVRCIAAAV PGAPAPTAVS VSGPEGRLTD EAVRDIAPAV
RRTAARLAEH LVQRNDE