Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09640 |
Symbol | |
ID | 8386301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 992942 |
End bp | 993715 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975054 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003132848 |
Protein GI | 257055016 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.936146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.241147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTCTG CCAGATCGGG CAACAGCGGC GTCCAATCGC TTCAGCGCGC ATTCGAACTG CTGGAGCGAC TCGCCGACGC GGGAGGTGAG GCGAGCCTGT CGGAACTGGC CGCCTCGTCC GGGCTGCCCA TGCCCACGAT CCACCGGCTC ATCCGCACTC TCGTCACCCT CGGCTACGTC CGGCAGAACA CCAATCGCCG CTACGCGCTG GGGGCACGGC TGATCCGACT CGGGGAGAAC GCCAGTCTCC AGTTCGGCAC CTGGGCCCGA CCGCTGCTGG CCGAACTGGT GGACGAGGTC GGTGAGACCG CGAACCTGGC CGTACTGGAA CGCGACGAGG TCGTGTACGT GGCGCAAGTG GCGTCGAACC GGCACTCGAT GCGCATGTTC ACCGAGGTGG GTCGCAGACT GCTCCCCCAC GGTACGGGAG TCGGCAAGGC CATGCTGGCC ACACTGGCCC CGGACGACGC GCGGGCCCTG TTACAGCGCA CCGGCATGCC CGCCTACACC GAGCACACCC ACACCGACAT CGACTCCCTG CTCGACCACC TCGCCGAGAT CTCCGAACAG GGTTACGCCC TCGACTCCAG CGAACAAGAA CTCGGCGTGC GGTGTATCGC GGCGGCCGTT CCCGGCGCTC CGGCACCCAC GGCGGTGTCC GTCTCAGGCC CGGAGGGACG CTTGACCGAC GAAGCCGTAC GCGACATCGC ACCCGCTGTG CGGCGAACGG CGGCGCGACT GGCGGAACAC CTCGTCCAAC GCAACGACGA GTGA
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Protein sequence | MASARSGNSG VQSLQRAFEL LERLADAGGE ASLSELAASS GLPMPTIHRL IRTLVTLGYV RQNTNRRYAL GARLIRLGEN ASLQFGTWAR PLLAELVDEV GETANLAVLE RDEVVYVAQV ASNRHSMRMF TEVGRRLLPH GTGVGKAMLA TLAPDDARAL LQRTGMPAYT EHTHTDIDSL LDHLAEISEQ GYALDSSEQE LGVRCIAAAV PGAPAPTAVS VSGPEGRLTD EAVRDIAPAV RRTAARLAEH LVQRNDE
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