Gene Svir_09170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09170 
Symbol 
ID8386254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp942093 
End bp942650 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID644975008 
Producthypothetical protein 
Protein accessionYP_003132802 
Protein GI257054970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.73086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA CCGGTGCCCC ACCCCGGATT CTGATCATCG TCGCCGCGGT ACTGGCCACG 
GCGCTGGTCG TCGCGATCAC TGTGCTGGGT TTCGTACTCT CGTCCGACAC CGATTCGAAC
GGTGGCCCCG GCGACGTCGA CGAGCCCGGC CCGCTGCCGC TGGTCTCCGT TCCGGCTCCT
GAAGCCGACT CCGAGGAATG TACAAAGCTC ATCGAGGCCG CGCCACGCGA ACTGGAGTCG
GCCGGACAGC GATTGGCCCC GCGGGAACTG GCACAACCCG CTCCCCCGGC CGCACTCGCG
TGGGGTGAGG ACAACCCGGT GGTACTGCGG TGCGGGTTGG AACGGCCGCC TGAGCTCACA
CGGTCCTCAC CGCTGCGTCA GATCCAGACA GTGCAGTGGC TGCCCGTCGA GGGTGAGGGC
ACGACGACGT GGTACGTCGT CGACCGGCCC GTGTACATCG CCCTCACCGT TCCGGAGACC
GCGGGGACGG GGCCCCTGCA GCAGATCTCC GAAACGGTGG CGGAGGAGCT GCCCGCCGTT
CCGCTGGAAT TCGAATGA
 
Protein sequence
MSETGAPPRI LIIVAAVLAT ALVVAITVLG FVLSSDTDSN GGPGDVDEPG PLPLVSVPAP 
EADSEECTKL IEAAPRELES AGQRLAPREL AQPAPPAALA WGEDNPVVLR CGLERPPELT
RSSPLRQIQT VQWLPVEGEG TTTWYVVDRP VYIALTVPET AGTGPLQQIS ETVAEELPAV
PLEFE