| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08950 |
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| Symbol | |
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| ID | 8386232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 919547 |
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| End bp | 920575 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974986 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003132782 |
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| Protein GI | 257054950 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.102676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCCG GTGACGGGAT CGGGCCCGAG GTCGTGACCG AGGCGCTGAA GGTGCTGACC
GAGGTCGTGC CGAATGCCGA GATCACCAAG TACGACCTCG GCGCATCTCG CTGGCATGCC
ACAGGCGAAT TGCTGCCCGA GTCGGTGTTG AATGAACTCC GCCAGCACGA TGCCATCCTG
CTTGGCGCCG TCGGTGATCC GAGTGTGCCC AGCGGCATCC TGGAGCGCGG TCTGCTGCTG
CGTCTGCGCT TCGAGCTCGA TCACCATGTC AACCTTCGTC CGGGCCGGCT CTATCCGGGC
GTGCGCAGCC CGCTCGCCGC GCCGGGGGAA GTGGACATGG TCGTGGTGCG GGAGGGCACC
GAGGGGCCGT ACGCGGGTAA CGGCGGCCTG CTGCGCAAGG ACACCGAGCA GGAGATCGCC
ACCGAGGTCA GTGTCAACAC GGCGTTCGGT ATCCGGCGTG TGGTGGCCGA CGCCTTCGCC
CGTGCCGAAC GGCGTCCGCG CAAGCATCTC ACCCTGGTGC ACAAGACGAA CGTCCTCGAA
CACGCTGGTT CGCTGTGGTC GCGGATCGTG GAAGAGGAGT CGCTGAAGCA CCCCGACGTG
ACCGTGGCGT ACTCGCACGT GGACGCCGCC ACGATCCACC TCGTCACCGA CCCCGGTCGC
TTCGACGTCA TCGTCACCGA CAACCTGTTC GGCGACATCA TCACCGATCT CGTCGCCGCG
GTGACCGGTG GTATCGGGCT GGCGGCGAGC GGCAACCTCG ACATCACGCG CCGCAACCCG
AGCATGTTCG AGCCCGTGCA CGGCAGCGCC CCCGACATCG CGGGGCAGAA CCTCGCCGAC
CCCACGGCGG CCGTGCTGTC CGTCGCGCTG CTGCTCGATC ACCTCGGGGA GAAGGAGGCC
GCGCGTCGTA TCGAGGCGTC GGTGGCGTTC GACCTCGCTA CCCGGGATCA GAACTCGCCG
GGCAGCACGC AGGCGATCGG CGACCGGCTG GCCGCGTTGG TCTCCTCGAA CACCCGTCAG
ACGAGCTGA
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| Protein sequence | MIPGDGIGPE VVTEALKVLT EVVPNAEITK YDLGASRWHA TGELLPESVL NELRQHDAIL
LGAVGDPSVP SGILERGLLL RLRFELDHHV NLRPGRLYPG VRSPLAAPGE VDMVVVREGT
EGPYAGNGGL LRKDTEQEIA TEVSVNTAFG IRRVVADAFA RAERRPRKHL TLVHKTNVLE
HAGSLWSRIV EEESLKHPDV TVAYSHVDAA TIHLVTDPGR FDVIVTDNLF GDIITDLVAA
VTGGIGLAAS GNLDITRRNP SMFEPVHGSA PDIAGQNLAD PTAAVLSVAL LLDHLGEKEA
ARRIEASVAF DLATRDQNSP GSTQAIGDRL AALVSSNTRQ TS
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