| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08870 |
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| Symbol | |
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| ID | 8386224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 911604 |
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| End bp | 913466 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974978 |
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| Product | acetolactate synthase 1 catalytic subunit |
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| Protein accession | YP_003132774 |
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| Protein GI | 257054942 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCG CCACCTCGCG ATCGGACGCG ACCGCCGAGT CGACACCGAC CACGGCGTCG
CCCGGCCATT CCGGACCCCG CCCCAAGCCC GCGCCCCCTG CAGGGACACC CGTCCGGGTG
ACGGGTGCGC AGTCGCTCGT GCGTTCCCTT GAGGCCATCG GTGTCGAGGC GGTATTCGGC
ATTCCCGGTG GCACGATTCT CCCCGCGTAC GACCCGTTGC TCGACTCCAC GAAGGTCCGG
CACGTGCTTG TGCGGCACGA ACAGGGTGCC GGTCACGCGG CGACCGGCTA CGCGCAGGCC
ACCGGCAAGG TCGGTGTGTG CATGGCGACG TCGGGGCCGG GTGCGACGAA CCTCGTGACC
CCGCTGGCGG ACGCCTATAT GGACTCGGTT CCTGTGGTGG CCATCACGGG CCAGCAGACC
CGTGCGCTCA TCGGTAGCGA CGCCTTCCAG GAAGCCGACA TCTGCGGCAT CACCATGCCG
ATCACCAAGC ACAACTTCCT GGTCACCGAT CCGGCGGACA TCCCGCGGGT GATCGCCGAG
GCGTTCCACC TGGCGAGCAC GGGACGTCCC GGGCCGGTGC TGGTGGACAT CCCCAAGGAC
GTGCTGCAGG AGACGACCTC GTTCGCGTGG CCTCCGGAGA TGCGGCTGCC CGGTTACCGG
CCGACACTGC GTCCGCACGG CAAACAGGTC AGGGAAGCCG CGCGGTTGAT CAGGAAGGCC
AAGCGTCCGG TGCTCTACGT GGGTGGCGGT GTACTCAAGG CCAGGGCCTC GGAGCAGTTG
CGGGAGTTGG CCGATCTCAC CGGTATCCCC GTGGTGACGA CGTTGATGGC GCGTGGGGCC
TTCCCCGACT CGCATCCCCA GCACCTGGGC ATGCCGGGCA TGCACGGCTC GGTCGCCGCG
GTCGCGGCCA TGCAGCGCGC GGACCTGCTC GTGGCGCTGG GCGCGCGGTT CGACGACCGG
GTCACCGGCA GGCTGGACAC GTTCGCCCCT GACGCCACGG TCGTGCACGC CGACATCGAC
CCGGCGGAGA TCTCGAAGAA CCGCAAGGCC GATGTGCCGA TCGTCGGTGA CTGCGCCGAG
ATCATCACCG AATTGATCGC GGCGGTGAAG ACCGAGATCG CGAACGGGAA ACCCGCCGAT
CTGTCCGAGT GGTGGGCCCA GCTCGACTCA TGGCGGGAAC GGTTCCCCGC CGGGTACGAG
TGGCCGTCCG ACGGGACGCT GGCCCCGCAG TACGTCATCG AGCGTCTCGG CCAGCTCGTG
GGTCCCGACG CCATCTACAC GGCCGGGGTC GGACAGCATC AGATGTGGGC GGCGCAGTTC
ATCAAGTACG AGAAACCGGG GACGTGGATC AACTCCGGTG GCCTCGGCAC GATGGGCTAC
GCGGTGCCGG CCGCGATGGG TGCGAAACTG GGGCGGCCCG ACAAGCAGGT GTGGGCCATC
GACGGCGACG GCTGCTTCCA GATGACCAAC CAGGAACTGG CCACGTGCGC CATCGAGGGA
CTGCCGATCA AGGTGGCCGT CATCAACAAC GGCAACCTCG GCATGGTGCG CCAGTGGCAG
AACCTGTTCT ACGCCGAGCG TTACTCGAAC ACCGACCTGG GCACCCACAA GCACCGCATC
CCGGATTTCG CGTTGCTGGC CGAGGCGCTG GGCTGCGCGG GGCTGCGGTG TGAGACCAAG
GACGAGGTCG ACGACACCAT CCGCAGGGCG ATGGAGATCA ACGACCGTCC CGTCGTGATC
GATTTCGTCG TCGGTAAGGA CGCACAGGTC TGGCCGATGG TGGCGGCGGG AACCAGCAAC
GACGAAATCA TGGCCGCACG GGACATTCGG CCGCTGTTCG ACGACGACGA GGTGTCGCAA
TGA
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| Protein sequence | MTSATSRSDA TAESTPTTAS PGHSGPRPKP APPAGTPVRV TGAQSLVRSL EAIGVEAVFG
IPGGTILPAY DPLLDSTKVR HVLVRHEQGA GHAATGYAQA TGKVGVCMAT SGPGATNLVT
PLADAYMDSV PVVAITGQQT RALIGSDAFQ EADICGITMP ITKHNFLVTD PADIPRVIAE
AFHLASTGRP GPVLVDIPKD VLQETTSFAW PPEMRLPGYR PTLRPHGKQV REAARLIRKA
KRPVLYVGGG VLKARASEQL RELADLTGIP VVTTLMARGA FPDSHPQHLG MPGMHGSVAA
VAAMQRADLL VALGARFDDR VTGRLDTFAP DATVVHADID PAEISKNRKA DVPIVGDCAE
IITELIAAVK TEIANGKPAD LSEWWAQLDS WRERFPAGYE WPSDGTLAPQ YVIERLGQLV
GPDAIYTAGV GQHQMWAAQF IKYEKPGTWI NSGGLGTMGY AVPAAMGAKL GRPDKQVWAI
DGDGCFQMTN QELATCAIEG LPIKVAVINN GNLGMVRQWQ NLFYAERYSN TDLGTHKHRI
PDFALLAEAL GCAGLRCETK DEVDDTIRRA MEINDRPVVI DFVVGKDAQV WPMVAAGTSN
DEIMAARDIR PLFDDDEVSQ
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