| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08770 |
|---|
| Symbol | |
|---|
| ID | 8386214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 899427 |
|---|
| End bp | 900584 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644974968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132764 |
|---|
| Protein GI | 257054932 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG TGGCCTGTGC CGCGTTGGGG CTTGCGGGGT GCGCCGAATT CGACGACTCC
ACCGCCGCCA CCGATTGGCA CGCGGCACCC GAACTCACCG CCGAGGCCGG ACCCCAACCA
CAGTTGCCCG AAGCCGGCCC CAACGTCATC CCCGATCCCC CCTCGACCTC CACGACTCCC
ATGCGTCCCC CCGAGGGCTG CACCGACTTC GACAAGGCGG TCATCGCCAC CTGTCTGGAC
ACCGTGTCGG CCGTCGCGGC GTTGCCCTCG GACGGCTCCA GCGTCACCGC GCTCGCCGGG
GAACGACGCA GTGGCCGGGT GTTCCTCGTC AACACCGACG GAGAAGAACG CGAATTCGCC
GCTCTCGACG TCCAGGCCGC CGGAGACGGG GGACTGACCG GGCTCGCGCT CTCCCCCACC
TACGCCGAGG ACGGCCTCGT CTTCGCCTAC GTCACGACGT CCACCGACAA CCGGGTCGTC
CGGTTCGCCG AGGGACAATC GGCCAAACCC GTACTCACGG GAATCCCGAA GGGGCCGAAG
AACAACGGAG GCGCGCTCCT GGCCACCGCG GACGGGTCCC TGCTGGTCGC CACCGGAGAC
GCGGGGAACC CTCGTGCCGC GGCCGATCGC ACGTCGCTGG CGGGCAAGAT CCTGCGCATC
GACGCGTCGG GGAGACCCGC CGAGGACAAC CCCGAGGCCG ACTCGGCCGT GTACGCCAGC
GGCCTGCACT CACCCGGCGG GATGTGCCAG GCCATGGACG GCTCCCGACT GTGGGTCACC
GACCGGACCG AACGACACGA CGCGGTGTAC CGCATCGAAG CGGGCGAGGA ACTGACCTCG
CCCGTGTGGA CGTGGAAGGA CAAACCCGGG GTCAGTGGTT GCTCCGACTG GACCGACACC
CTCGCCGTGT CCACGGAGGA GGCCGGCAAC ATCCAAAACC TCCCCCTCAC CGCGGAAGGT
TCGGTCAGCG GTGACCCCCA GACCACGTTG GACGGCAGGA ACGGCCCCGG CTACGGCCGG
ATCGGCAGCC TCGACCAGGT GACTCAGGAC GTCGCCGTCG CGGGCACGGT CAACAAGGAC
GGTGGTGACC CGGTGTCCAG CGACGACCGC GTCGTGCTCA TCGTCCGGCA GCCCGCTTCC
GGCTCCGGCC GCGACTGA
|
|---|
| Protein sequence | MTVVACAALG LAGCAEFDDS TAATDWHAAP ELTAEAGPQP QLPEAGPNVI PDPPSTSTTP
MRPPEGCTDF DKAVIATCLD TVSAVAALPS DGSSVTALAG ERRSGRVFLV NTDGEEREFA
ALDVQAAGDG GLTGLALSPT YAEDGLVFAY VTTSTDNRVV RFAEGQSAKP VLTGIPKGPK
NNGGALLATA DGSLLVATGD AGNPRAAADR TSLAGKILRI DASGRPAEDN PEADSAVYAS
GLHSPGGMCQ AMDGSRLWVT DRTERHDAVY RIEAGEELTS PVWTWKDKPG VSGCSDWTDT
LAVSTEEAGN IQNLPLTAEG SVSGDPQTTL DGRNGPGYGR IGSLDQVTQD VAVAGTVNKD
GGDPVSSDDR VVLIVRQPAS GSGRD
|
|---|
| |