| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07780 |
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| Symbol | |
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| ID | 8386115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 803032 |
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| End bp | 805524 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644974871 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003132668 |
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| Protein GI | 257054836 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGC TGGACACTCT GGTGTTGCCC GACCTTCCGG TGCGCGCCGT ACTCGACGAC
GTGACCACCG CGCTACGGGC ACGGGGCACC GCCGTTTTAG TGGCACCCCC GGGTACGGGG
AAGACGACTC TCGTCCCACT CGCCCTGGCC CGCGAAACCG AGGGCACCGT CGTGGTCGCC
GAGCCTCGCA GACTCGCCGC GCGGGCGGCC GCCGCGCGCA TGGCGGCGCT GCTGGGCGAA
CCGGTCGGCG AAACCGTCGG CTACTCGATA CGAGGCGACC GCAGGGTCTC GGACCGCACC
CGGGTGGAGG TCGTCACCTC GGGACTGCTC GTACGACGCC TGCAGCACGA TCCCGAACTG
CACCGCACCT CGGTGGTGCT GCTCGACGAA TGCCACGAAC GCCATCTCGA CGCCGACCTC
CTACTGGCCC TGCTGCTCGA CGCCAGAGCG GGGCTGCGGG ACGATCTACG GCTGCTCGCC
ACGTCGGCCA CCGTGGCTTC CGAGCGGCTG GCCGCACTGC TCGGCGACGC ACCGGTCATC
ACGGCGCACG CCGCAGTGCA TCCCGTCGAC GTCGTGCACC GGCCACCCGA CCGGGGCGAG
CGCATCGAGG CGTGCGTCGC GAGGACCGTC CGAACGGCAC TGTCCGAGCG TGAGGGGAAC
ATCCTCGTCT TCCTGCCCGG CGTCGCCGAG ATCGCCCGTG TGGCCGCGTT ACTCGACGGA
GTCGACGCCG ACGTCGTGTC CCTGCACGGT CGACTGTCCC CACAACGTCA GGACGCCGCG
CTGAGACCGG GGCCACGGCG ACGGGTCGTG TTGGCCACGG CGGTGGCCGA GTCGAGTCTG
ACGGTGCCCG GCGTGCGCGT GGTGGTGGAC TCCGGGCTGG CCCGGGTGCC CAGGGTGGAT
CATCGCCGTG GCCTGCCGGG ACTGACCACC GTGCGAGTGT CGCGGGCCGT GGCTGATCAG
CGTGCGGGCC GGGCGGGACG GGAGGCCCCC GGCACCGTCT ACCGGTGCTG GCCGCACTCC
GAACACGCGA GTCTGCCCGC CTACCCCGAA CCGGAGATCC GCACCGCCGA ACTCTCCCGA
CTGGCATTGG AATTGGCATG TTGGTCCACT CCGGACGGTT CGGGACTGGC CTGGTGGGAT
CCACCGCCCG AGGGGGCGTT GACCGCGGGT CGGAATCTGC TGCGCACGTT GGGGGCCGTG
GACGATGCCG GACGTCCGAC CGACCGCGGT CTGAGGATGG CGGCCCTGGG CCTGCACCCT
CGGCTGGCTC GCGCGCTGCT CGACGGGGCG GCCGAGCTCG GCGCGCGCCC GGCCGCCGAA
GTGGTGGCGG TTCTCGACGC CGGAGCGACC CACACCGATC TCGACACCGA GCTGTCCCGC
CTGCGTAGAG CGGACGACAC GGCCGCGCAG CGGTGGCGGC GGGAGGTCGA CAGGCTCACG
GCGCTCGTGT CCCGCGACCG GGACGGCAAG GCCGCCCAGG ACACCACCGT CGAGGACGGC
GAAGCCGAAA GCGGACACCC CCCACCGGAC TCCGCCACCG TGGTGGCCCT GGCCTATCCC
GAACGACTCG CACGCCGTCG ACGAAGCACC GCTTCACCGG TGTATCTGTT GGCCAACGGT
ACGGCGGTGG AGACTCCGCC CGGCAGCGGA CTCGGCGACA GCGAGTGGCT GGCGGTGGCC
GAGGCGACCC GGGAACCGGG GCGGGCACAC GGCGTCGTCC GGCTCGCCGC GACAGCGGAC
GAGGAACTGG CGGTGCGTGC CGGCGCTGCG CTGCTGAGCG AGCGCGACGA GATCGCGTGG
CTCGACGGCG ACGTCGTCTC CCGACGCGTA CGGCGACTGG GCGCCATCAC ACTGACCGAA
CGTCCGATAC CGGACCCCGA TCCGGCCGCC GTCCGCCAAG CCGTGGTGGC CGGGTTACGG
CAGGAAGGAC TGCGCCTGCT GCCCTGGCCC ACCGAAGCGA CGCGGCTGCG GCAACGCCTG
GCGTTCCTGC ACCGGCACGT GGGTGCCCCG TGGCCCGACG TCTCCGACGA GGCCCTCGTG
TCTCATCCGG ACGCATGGCT GGCCCCGGAG TTGGGGCGTA TACGCCGTCG CTCCGACTTC
GCGGACATCG ACACGGCCGC CGCGTTGCGC AGACTGTTGC CCTGGCCTGA GGCCTCCCGG
TTCGACGAAC TCGCCCCCGA CCGGCTGGAG GTCCCGTCGG GCTCCCGGGT ACGCGTGGAC
TACTCCGGCG ACGAACCGGT GCTCGCGGTG AAGTTGCAGG AGACGTTCGG TTGGCGGACC
ACGCCGCGCA TCTCAGACGG CAGGGTACCC GTGGTGTTGC ACCTGTTGTC GCCGGCGGGC
AGGCCCGCAG CGGTGACGTC GGATCTGGAA TCGTTCTGGC GCACCGGCTA TGCGGCGGTG
CGCGCCGAAC TCCGCGGCCG GTATCCGAAA CACCCCTGGC CCTCCGACCC CCTCACGGCC
GAACCGACGA AGGGCACCAA CCGACGCCGC TGA
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| Protein sequence | MSGLDTLVLP DLPVRAVLDD VTTALRARGT AVLVAPPGTG KTTLVPLALA RETEGTVVVA
EPRRLAARAA AARMAALLGE PVGETVGYSI RGDRRVSDRT RVEVVTSGLL VRRLQHDPEL
HRTSVVLLDE CHERHLDADL LLALLLDARA GLRDDLRLLA TSATVASERL AALLGDAPVI
TAHAAVHPVD VVHRPPDRGE RIEACVARTV RTALSEREGN ILVFLPGVAE IARVAALLDG
VDADVVSLHG RLSPQRQDAA LRPGPRRRVV LATAVAESSL TVPGVRVVVD SGLARVPRVD
HRRGLPGLTT VRVSRAVADQ RAGRAGREAP GTVYRCWPHS EHASLPAYPE PEIRTAELSR
LALELACWST PDGSGLAWWD PPPEGALTAG RNLLRTLGAV DDAGRPTDRG LRMAALGLHP
RLARALLDGA AELGARPAAE VVAVLDAGAT HTDLDTELSR LRRADDTAAQ RWRREVDRLT
ALVSRDRDGK AAQDTTVEDG EAESGHPPPD SATVVALAYP ERLARRRRST ASPVYLLANG
TAVETPPGSG LGDSEWLAVA EATREPGRAH GVVRLAATAD EELAVRAGAA LLSERDEIAW
LDGDVVSRRV RRLGAITLTE RPIPDPDPAA VRQAVVAGLR QEGLRLLPWP TEATRLRQRL
AFLHRHVGAP WPDVSDEALV SHPDAWLAPE LGRIRRRSDF ADIDTAAALR RLLPWPEASR
FDELAPDRLE VPSGSRVRVD YSGDEPVLAV KLQETFGWRT TPRISDGRVP VVLHLLSPAG
RPAAVTSDLE SFWRTGYAAV RAELRGRYPK HPWPSDPLTA EPTKGTNRRR
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