Gene Svir_06480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06480 
Symbol 
ID8385986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp662144 
End bp662662 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID644974745 
Producthypothetical protein 
Protein accessionYP_003132546 
Protein GI257054714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGA CCGGTCCATT CTCGTCGGGT CGACAGGCGG CGGGGTTGCC GCGTCTTCCC 
ACGCCACCGT CCGGTTGGCC GATCGGGTCC TACGCCACGT ATGAGGAGGC GCAGCGCGCC
GTCGATTACC TCGCCGACAA TGAGTTCCAG GTCCAGGACG TGACCATCGT GGGCGTGGAC
CTGATGTTGG TGGAGCGGGT CATCGGCAAG TTGTCATGGG GCCGGGTACT GGGTACCGGG
GCGTTGTCGG GCGCCTGGTT CGGGTTTTTC GTCGGCGTCC TCCTGATCAT GGTCAGTAGG
CCGGAGGAGA TGTGGTCGCC CGTGCTGTTG GGCCTGGTCG CCGGTGTGGT GTTCGGCGCG
GCGTTCGCCG CGATGAGCTA CGCCTTCACG CGTGGACGAC GCGACTTCTC GTCGGCGAGT
CAGCTGGTCG CGGGGCGCTA CGACGTATTG TGCCGGCCAC GGAACGCTGA AAAGGGACGC
GATCTGTTGG CCCGTCTGGC CATGGGGTCA CACAATTGA
 
Protein sequence
MIVTGPFSSG RQAAGLPRLP TPPSGWPIGS YATYEEAQRA VDYLADNEFQ VQDVTIVGVD 
LMLVERVIGK LSWGRVLGTG ALSGAWFGFF VGVLLIMVSR PEEMWSPVLL GLVAGVVFGA
AFAAMSYAFT RGRRDFSSAS QLVAGRYDVL CRPRNAEKGR DLLARLAMGS HN