| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06450 |
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| Symbol | |
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| ID | 8385983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 658598 |
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| End bp | 660151 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974742 |
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| Product | trypsin-like serine protease with C-terminal PDZ domain protein |
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| Protein accession | YP_003132543 |
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| Protein GI | 257054711 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC CAGCCACGCC GAACCAGGAG GAATCCGGGC ACCAGGAGTA TCGGCTCAGG
CCACGCCCGG TCATGCGGCC GCCGGTGGAT CCCGAAGCGG CGGCTGTGTT CGGTAGGCCG
AAGGGCGTGA AGGGTTCGTT CGACCTGCTT CACCGACCGG ACACGAACGT GTGTCCGGTT
TCGCTGCAGA CCGGTCCGCC CCCACCTGCG CTCGCGGAGG CTTTCGGACG TCGCCCGGGT
GAGGAGAACG TAGTACTGCA ACGCCCGGAC GGGTACGGGC GTTCCGACGA TCCCGCCGTC
TCTGACGGGG ACGGCGTCCG TGAGGACGAG GAAGGACCGC TGTGGGCCTC GGAATCGGAC
CCGTGGCGCG ATCCCAACTC CCCCGTCGTG CTGGGTGCCC CCGCCTTACG GGAACAAGAG
CGTGCCGAGG GCGACGTCGA ACGACCCACC GGCCCGTTGT TGAGCTTGCC GGAGGTGTTG
TTCGGTCGTC GTGTCAAGCC GACGGCACTG GCGTTGCTCG CCGTCGTCGC GTTGTTGATC
GGCGCCGGAG GCGGAGTGGT CGGATGGGCG CTCGCGTCGG CGGGCGACTC GCTCACCGGA
GAGTTGAACT TCGCGGAGGC CGAAGCCGCC AAGGAACGGC CGCCGGACTC GGTCGCGGCG
ATCGCGCAGA AAGTGGCACC CGCGGTGGTG TCCATCGAGG TCGAGGCAGG CCAATCGGGT
GGTGTCGGGT CCGGTGTGGT CATCGACCCC CAGGGCTACA TCCTCACGAA CCACCACGTG
GTGTCCTCCG CGATGCAGGA CGACGACACG AAGGTGACCG TGGTGTTCAT CGACGGCACC
CGTACGCGTG GCGAGATCGT CGGCACCGAT CCGAAAACCG ACCTCGCCGT GCTCAAGGTC
AACGTCGAGA ATCCCGTCGT CATCGAGATC GGTGACTCCG ACTCCCTCGC GCCCGGCGAT
CGGGTCATGG CCATCGGTTC CCCCTTCGGG CTGGAGAACA CGGTGACCGA GGGCATCGTC
AGTGCCCTCA ACCGGCCGGT GACCGCGCCG GGTGAGAACG GGGACCCTCC GGTGACCTAT
GACGCCATCC AAACCGACGC CGCCATCAAC CCGGGTAACT CCGGGGGCGC GCTCGTCGAC
TCCACCGGTG CCCTCGTAGG CATCAATTCC ATGATCCGCA CCGTGGGTGA TTCGGGTGAG
GGCGGCAGCA TCGGGCTCGG GTTCGCGATC CCGGCCAACC AGGCGATCAG GATCAGCGAA
TCGCTCGTGC GCGACGGCAC CGTCAAACAT GCTTCCCTCG GGGTGAATGC CGCGTCGGTG
GCGGCCAACA CCTCGCGGGG TGCCCAGGTG CGGAACGTCG TCCCGGGCAG CCCTGCGGCG
CAGGCGGGTA TCAAGGAAGG CGACGTCATC GTGCGCGTGG GGGAACGGCA GGTGCGAAAC
GCCGCCGAGC TCACCGTGGC CGTGCGAGAG CACGACATCG GTGAGTCCGT CCCCGTGCGC
TTGGTGAGAG GTGGACGTCA GCTGACTGTC GAGGTCACCC TCGGTTCAGA TTGA
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| Protein sequence | MNEPATPNQE ESGHQEYRLR PRPVMRPPVD PEAAAVFGRP KGVKGSFDLL HRPDTNVCPV
SLQTGPPPPA LAEAFGRRPG EENVVLQRPD GYGRSDDPAV SDGDGVREDE EGPLWASESD
PWRDPNSPVV LGAPALREQE RAEGDVERPT GPLLSLPEVL FGRRVKPTAL ALLAVVALLI
GAGGGVVGWA LASAGDSLTG ELNFAEAEAA KERPPDSVAA IAQKVAPAVV SIEVEAGQSG
GVGSGVVIDP QGYILTNHHV VSSAMQDDDT KVTVVFIDGT RTRGEIVGTD PKTDLAVLKV
NVENPVVIEI GDSDSLAPGD RVMAIGSPFG LENTVTEGIV SALNRPVTAP GENGDPPVTY
DAIQTDAAIN PGNSGGALVD STGALVGINS MIRTVGDSGE GGSIGLGFAI PANQAIRISE
SLVRDGTVKH ASLGVNAASV AANTSRGAQV RNVVPGSPAA QAGIKEGDVI VRVGERQVRN
AAELTVAVRE HDIGESVPVR LVRGGRQLTV EVTLGSD
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